Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01201 ATGTTTTACCAGGGTACTCAACTCCCCCCTCCAAAAGGCAATGATTCACCTGATGGTGTTCGAGTTTCACCAAGAGTCAGACTCAGTGATGGAAGGTACCTTGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACAGCATCATCATTGTCCACGGCTTTGGCAGCTCCAAAGACATGAATTTTCTGGCACCCCAAGAACTGATAGATGAATTGGGCATATATATTCTTCAATATGACCGGGCAGGGTATGGAGAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATCGAAGAGCTCGTTGATCAGTTACAGATAGGGTCAAAATTTTATGTGATTGGAGTCTCTATGGGGTCATATGCTACATGGAGTTGTTTGAAATACATCCCCAACAGGATAGCAGGTGTAGCTATGATAGCCCCAGTGATAAATTATCAATGGCCTTCCTTTCCAGGGAGTCTGATAAAAGAGGACTACAGGATGAAACTTATCAAGTGGACCGTGTTGCTTGCAAAATATTTCCCTAGGCTGTTGCAATGGTGGGTGACTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAACCCAGCTTTCTTCAACAAAAGAGATATCGATATTTTAGAAACTATTCCTGGGTTCCCAATGCTTAGCAAGGACAGATTAAGGGAACAGGTTGTTTTTGACACTCTGAGAGATGACTGGATGGTGGCCTTTGGCAAGTGGGAATTTGACCCTATGAAGCTAAGTAATCCATTTCCTCAGAACACAGGTTCAGCTCACATTTGGCAGGGCTATGAAGATAAGGTAGTGCCCTCTCAAATCCAAAGGTTTGTTACAGAGAAGCTGCCTTGGATACAGTATCATGAAGTTCCAGATGGTGGTCATTTGATTGTGCACTATAGTGGCTTATGTGAGGCCATTCTGAAGGCACTTTTACTTGGAGAACAAAATCTTTCATATAGACCTAGATCGGAAGTAGTTGTATCTTGA 1014 0.43 MFYQGTQLPPPKGNDSPDGVRVSPRVRLSDGRYLAYREKGVPKDQAKHSIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELVDQLQIGSKFYVIGVSMGSYATWSCLKYIPNRIAGVAMIAPVINYQWPSFPGSLIKEDYRMKLIKWTVLLAKYFPRLLQWWVTQKWLPSNSVIEKNPAFFNKRDIDILETIPGFPMLSKDRLREQVVFDTLRDDWMVAFGKWEFDPMKLSNPFPQNTGSAHIWQGYEDKVVPSQIQRFVTEKLPWIQYHEVPDGGHLIVHYSGLCEAILKALLLGEQNLSYRPRSEVVVS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01201 337 Gene3D alpha/beta hydrolase 22 320 IPR029058 -
Spst11g01201 337 FunFam Alpha/beta-Hydrolases superfamily protein 20 320 - -
Spst11g01201 337 Pfam Alpha/beta hydrolase family 50 305 IPR000073 -
Spst11g01201 337 SUPERFAMILY alpha/beta-Hydrolases 24 306 IPR029058 -
Spst11g01201 337 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 2 324 - -
Spst11g01201 337 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01201 Spst-Chr11 36326003 36332061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01201 - - gmx:100803294 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02738 1 35822712 35831677 Spst11g01201 11 36326003 36332061 ECH
Spst5g00641 5 5509936 5516793 Spst11g01201 11 36326003 36332061 ECH
Spst11g01201 11 36326003 36332061 Spst11g01201 11 36326003 36332061 ECH
Spst5g00641 5 5509936 5516793 Spst11g01201 11 36326003 36332061 PCT