Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01198 ATGGGGAGCCAAAGAATAGGAGAAACGGGTCTGTCTGAGTCAGGACCTTCAAGTCACCATGTCCCTTATGGAGTTCTTCATGGGATCAATACCTCATCATCAGGACTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCTATTGTTCTGCAAGGAATTAAGATAAGAAATGATGAAGCCAAAGCATCAGCTTTATTCACAGGCAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCTCAAGAGGGGGTTCAAAGTCAGGAGGCGAAAGCACTGATTCAGGATCAGGAATAAACACTCTTTCAAGCAAAGCTGAGCTCCAATTTGAAACAGATTCTCCCATAAGCATAAAAGCATCTTCTTCAGATCATCAACAGGCTTTTGATCAGCTTCAACAACAACAGGAGACAGCAACTGATGCCTCAAGGGCAGGCACATCACAGAATCAATCAGCAGCCAAATCACCTCAAGAAAAGAAGAAAGGAGCTGCTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGTGTGTTTATGGGTTGTGGTGGTGCTGGTGGCAGTGTAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGTTAGAAGACGACCACCGACACATGGCGGAGCTCCGGACCGGGCTTCAGGCGGCGCTGTCGGACGGAGAGCTAAGAGTGATTGTGGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAGGGGATGGCTGCTAAAACAGATGTGTTTCATCTCATCAATGGCATGTGGACTTCACCAGCTGAGAGATGCTTCCTCTGGATTGGTGGTTTTAGACCGTCAGAACTCATCACAATGTTGATACAACAGTTGGAGCCCCTAGCTGAGCAGCAAATAATGGGCATATATGGCCTCCGGCATTCCTCACTGCAAGCAGAAGAGGCTCTCACTCAAGGTCTTGAACAGCTTCAGCAGTCTCTCGTCGACACCATCGCCGCCACCTCCGTCGCCGACGGTGTGCAGCAGATGGTGGCCGCCATGGCCAAACTTGCCAACCTTGAAGGATTTGTTGGTCAGGCTGATAATTTGAGGCAACAAACCCTTCACCAGTTGTGTCGATTACTCACAGTTCGTCAAGCAGCAAGATGTTTTCTTGTTATTGGAGAGTATTATGGTCGTCTAAGAGCCCTAAGTTCTCTCTGGGCATCAAGACCACGCGAGAGCTTGATGAGCGATGACAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCAACCTTCTCAGAATCACTTCTCCAATTTCTGA 1464 0.4747 MGSQRIGETGLSESGPSSHHVPYGVLHGINTSSSGLMNQGSAFDFGELEEAIVLQGIKIRNDEAKASALFTGRPSATLEMFPSWPMRFQQTSRGGSKSGGESTDSGSGINTLSSKAELQFETDSPISIKASSSDHQQAFDQLQQQQETATDASRAGTSQNQSAAKSPQEKKKGAASTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSVSSGAAMFDMEYARWLEDDHRHMAELRTGLQAALSDGELRVIVDGYLSHYDEVFRLKGMAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITMLIQQLEPLAEQQIMGIYGLRHSSLQAEEALTQGLEQLQQSLVDTIAATSVADGVQQMVAAMAKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRESLMSDDNSCQTTTELQMVQPSQNHFSNF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01198 487 SMART brlzneu 181 257 IPR004827 GO:0003700|GO:0006355
Spst11g01198 487 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Spst11g01198 487 Gene3D - 184 232 - -
Spst11g01198 487 FunFam BZIP family transcription factor 184 233 - -
Spst11g01198 487 Pfam bZIP transcription factor 184 226 IPR004827 GO:0003700|GO:0006355
Spst11g01198 487 Coils Coil 211 231 - -
Spst11g01198 487 Pfam Seed dormancy control 265 340 IPR025422 GO:0006351|GO:0043565
Spst11g01198 487 PANTHER TRANSCRIPTION FACTOR TGA9 127 459 - -
Spst11g01198 487 MobiDBLite consensus disorder prediction 172 186 - -
Spst11g01198 487 MobiDBLite consensus disorder prediction 131 186 - -
Spst11g01198 487 SUPERFAMILY Leucine zipper domain 185 227 IPR046347 GO:0003700|GO:0006355
Spst11g01198 487 MobiDBLite consensus disorder prediction 81 110 - -
Spst11g01198 487 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Spst11g01198 487 MobiDBLite consensus disorder prediction 84 110 - -
Spst11g01198 487 MobiDBLite consensus disorder prediction 131 167 - -
Spst11g01198 487 ProSiteProfiles DOG1 domain profile. 248 456 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01198 Spst-Chr11 36291310 36297513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01198 157 487 bZIP Transcription Factor Family AT1G08320 73.193 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst11g01198 DOG1 5.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01198 K14431 - gmx:100101904 814.683