Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01165 ATGTCTTCCACTAAGAAAAGTCTTCTTAGAACCGTGTTTACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAATCCTCTCAAGTGCATGACCCAACCCCAAAACCCAAAACCTCCCACACTCACCAAAAACCAAACAACCTTAGCAGCATGGCCTCTTCGACCACTTCCATGGAACACATTGATGAAGAAGAGTTCACCTCTACCACACTATCCGAATCCGAGACACTTCATGATCACAACAATCTCAACAATGTTGTACTCAAACGAAGCCCTCTTGTGGACAGTGTGGCAGTTGAGAAGGACTCTTCCAACCCATATCATGATTTCAGACACTCCATGCTCCAAATGATCTTTGAGAGAGAGATCGAGTCAGAGGACGATCTTCAAGATCTTCTGCAATGCTTTCTTCACCTGAATGCACCATGTCACCACCATGTCATCGTGAAAGCCTTCAGTGCCATCTGCGAAGAAGCGTTTCCTCGCAAGGCTATTACCACTCCCGCCGCGTCTGAACCTTCTCCCTCTCGCCGGAGCCCCCTCGCCGTTCGAAAGAGCAAGTGA 564 0.4805 MSSTKKSLLRTVFTANGSCGCSKTKSSQVHDPTPKPKTSHTHQKPNNLSSMASSTTSMEHIDEEEFTSTTLSESETLHDHNNLNNVVLKRSPLVDSVAVEKDSSNPYHDFRHSMLQMIFEREIESEDDLQDLLQCFLHLNAPCHHHVIVKAFSAICEEAFPRKAITTPAASEPSPSRRSPLAVRKSK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01165 187 MobiDBLite consensus disorder prediction 165 187 - -
Spst11g01165 187 NCBIfam uncharacterized plant-specific domain TIGR01568 97 156 IPR006458 -
Spst11g01165 187 MobiDBLite consensus disorder prediction 20 56 - -
Spst11g01165 187 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 30 159 IPR038933 GO:0045892
Spst11g01165 187 Pfam Transcriptional repressor, ovate 103 158 IPR006458 -
Spst11g01165 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Spst11g01165 187 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01165 Spst-Chr11 35994617 35995180 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst11g01165 Ovate 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01165 - - gmx:102660065 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00671 5 5765661 5766173 Spst11g01165 11 35994617 35995180 PCT