Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01157 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGAGGAGCATTTGGAGCTGCTATTCTTGTTCACCACAAGGCTGAGAAGAAGAAATATGTGTTAAAAAAAATCAGGCTAGCAAGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCATCCATACATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACCGGATATTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTAGAATACCTGCACTCCAATTTTGTTTTGCATCGTGACCTAAAGTGTTCCAACATTTTTCTTACAAAGGATCAGGATGTTCGCCTAGGGGACTTTGGTCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCCTCTGTGGTAGGGACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATACCGTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGGTTGATAAGCAAGATTAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGTATGCTAAGAAAAAATCCTGAGCATCGGCCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTACAGCCTTACGTAGATCAATACCGTCCAGCTTTCAGTCCTCCAACAACCTGTTCTCCTGAAAAGCCAATTTCTACTGTCAATTATCCTCGGAAAAATATGGCTGAAAGTCAAAACAGTAGTAGTTCCAACAGCGACAAAGACAGTTTGATGTCAAATGAGAAAAACATTGCAACAGCAATACCGAAGTGTGATAACAAAACCACTGAGATGGATCAAACATCAATTGATGATGATGGTTCAGAGGAAGAAAGTGGCTCTAGTAATGCCAACGGCAATACCAAAATAGCTGAGCAAATGGTGATGAAACCATCTCATAATGCACACCATTCTCATGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAAGAAGGAAAGGTGAGAGAAGCAACTTCTCCAATGAGAGGCAATCGCATAAAGCCTGCTGGTGTATCAACACAGAAAATAAGTACCGAGACATTGTCTAAATTGCCTAAGCCTAATTTTCTTGCCCCTAGTGTCAAGCCTAACTTAGAATCACCTACTGTAGCACTTTCACGAGCAACCCCTGACTCAGCAAAAAGAATGCAGGGGTCACATCATTCAAAGCAACAGTTTCTGATGATAGAAGCCTCACCGAAACTTAAAGCTAGACATGATTTGACTCCACCACCTGCGGTTGTCAAACAAGTAGATGGAGATGTTGTTCCTCCCAAGCCAAGACAAAGGACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCTGGAAGACTGAGGCTGGCTGGAATTGATGTTCCAAATGCAGCAAGTGATACTGGAAAGCTAGGTACAGATAAAATAGTCCAGGAACCTGAGATGAGCCCTTGTCAGTTGGCCAACGACAATGTACCAAATATTTCAAAACACGTTACTAGAGAGCCCCAGAAGGCTTTTGAAAGAAGTTCCAAAGGAATGCAAATAGACAGCAGCAATTCTGCTTCATCTTCAGTTTCTATCCAAGGAGGTGAACTTGCTGATGATGCTACAACTTTTATTGACATGAGAGAACAGATGCTTCCTGGACATGAGAATATAAGCCACATTGTACGTGTGGAATCATGTCCTGACAGCAGCCTGCCGACAACTTGTGCACATTGTAAGATGGTTGAAAAAGTTCCTAACGATTCCTGTGAGGTTGCCATAAATTTTCAGAATACTGTAAGTAGTAACGAGAAAGTGAGTTCCAGTTTAAGTCAAGATCATCATGTTGAAGATTCTAAGGAAACACTTGCTTCAGAAGGCGGTCTTCTTGTATACCAGACAACCATGTCTACTACATCCGGCTGTGATAATAGATCTGTAGACCCCTCTGCTGGAGCCACCAAAGAAATTAAAGATTTTCAAGATATTACCAAGGAAATGCCTTTGGCCAAGTCTCCCAAACATGTACCCCCAAGTTCTGGAGAAAAGTCTGTTCATGTTGAAGCTACTCCAGAAAGTGAACCTGATCTACTTATCCAGCCAACACTTGGATGTAAGTCCCCTGGTGATGACAAATTCACAGTGAGGGAACGACTGTCACCTATGGTGGAAACTATTCCTCTGGTTACCCCTACAAAATTATCAAGCCAGAACGTTTTGCAAGAGAAAGGAACTGTGCTGCAGAATCCAGCACCGGAGAGGCCTGATACTGGCCATCTTCCTCCCGCCTTCGATGATGTTATCCATGTCATACGCCATAGTAGTTACCGCGTTGGAAGTGATCAGCCAGTAAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAGTTTATCAATGTTGTGAGGGATGATTTAGAAATGATGAACATAACCTCACCTTTGACCCTCAAATCTTCAAGCTGCTCTGATGTTACAAGCTTGAATTCTGAACAGTTGGAAATGAAGAGCTTAAACACTCCTCCCATCCTTAAATCTTCAAGTTTCTCCGATTCTTCCAGCATGAAATCTAGCAACTCTGATCATCCTGGTCTTAAGGAACAAGATGTGGTTAACCCTCCTCCTTTAGTTTCAGAACCTGAATCTACTGAGCTCAGTAAAAGTAACAGTCCCATGAATGACGAGAAACTACCAGCAAAGGAACCATTGGATGTGAAATCTTTCAGGCAGAGAGCAGAGGCACTCGAAGAGCTCTTGGAGTTGTCTGCAGATTTGCTGCAGCAGAACAGATTGGAGGAACTTCAAGTGGTTCTGAAGCCCTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAGAGTGGGGGACGCTCTTCATAA 3105 0.4274 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFSPPTTCSPEKPISTVNYPRKNMAESQNSSSSNSDKDSLMSNEKNIATAIPKCDNKTTEMDQTSIDDDGSEEESGSSNANGNTKIAEQMVMKPSHNAHHSHVESKQPKTIRNIMMALKEGKVREATSPMRGNRIKPAGVSTQKISTETLSKLPKPNFLAPSVKPNLESPTVALSRATPDSAKRMQGSHHSKQQFLMIEASPKLKARHDLTPPPAVVKQVDGDVVPPKPRQRTPPSLLRRPSFSGRLRLAGIDVPNAASDTGKLGTDKIVQEPEMSPCQLANDNVPNISKHVTREPQKAFERSSKGMQIDSSNSASSSVSIQGGELADDATTFIDMREQMLPGHENISHIVRVESCPDSSLPTTCAHCKMVEKVPNDSCEVAINFQNTVSSNEKVSSSLSQDHHVEDSKETLASEGGLLVYQTTMSTTSGCDNRSVDPSAGATKEIKDFQDITKEMPLAKSPKHVPPSSGEKSVHVEATPESEPDLLIQPTLGCKSPGDDKFTVRERLSPMVETIPLVTPTKLSSQNVLQEKGTVLQNPAPERPDTGHLPPAFDDVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMMNITSPLTLKSSSCSDVTSLNSEQLEMKSLNTPPILKSSSFSDSSSMKSSNSDHPGLKEQDVVNPPPLVSEPESTELSKSNSPMNDEKLPAKEPLDVKSFRQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01157 1034 MobiDBLite consensus disorder prediction 898 927 - -
Spst11g01157 1034 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01157 1034 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01157 1034 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01157 1034 MobiDBLite consensus disorder prediction 273 353 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 575 594 - -
Spst11g01157 1034 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 730 770 - -
Spst11g01157 1034 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Spst11g01157 1034 CDD STKc_Nek 7 262 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 571 594 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 941 955 - -
Spst11g01157 1034 SUPERFAMILY Protein kinase-like (PK-like) 4 312 IPR011009 -
Spst11g01157 1034 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Spst11g01157 1034 MobiDBLite consensus disorder prediction 484 512 - -
Spst11g01157 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Spst11g01157 1034 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 982 - -
Spst11g01157 1034 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Spst11g01157 1034 Gene3D Transferase(Phosphotransferase) domain 1 90 345 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 273 317 - -
Spst11g01157 1034 MobiDBLite consensus disorder prediction 898 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01157 Spst-Chr11 35920208 35926242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01157 14 263 MAP Kinase Kinase Kinase AT1G53570 31.765 1.10e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Spst11g01157 Pkinase 7.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01157 K08857 - gmx:100818747 1690.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00674 5 5785849 5793958 Spst11g01157 11 35920208 35926242 PCT