Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01152 ATGGGGGTTTTGCTCAAACAAGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTCTGGAAGATCGGTTGCAACAATTCCAAGTTGTTAATCTGGGAAGATTACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACTGTGGGGATGTCTAATTTTCCGTACCGAGATGGGGAAGGATGCTGGTTTTCTTCTGAGTCTCAGCTGGGGATTCAGGAGGAAGACAGAGTCTGTGGACTGATTAACAAAATGATGGTGAATACTTCAGTCAGTATTGCTGGAGAAGGGATAGTTGGACGGGCAGCATTTACAGGAAATTATCAGTGGATTCTTACGAACAATTTCAGTAGAGATGCATATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACGGTAGCAGTTATACCTGTGCTTCCCCATGGGGTTGTTCAATTTGCTTCTTTGTTACCAATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTATCTGAAGATTATTCAGCAAAAGTTTCTAATGAAAGAATTGGTGTACCTGTCACTGTTGATCCACCTGTCGTTACTTCTAACTGCACTCCCTTGGCAGTTAATGATTCCAACCAACTAACCAATTCTACTCTTGCTGCAAGGCCTGTTGCTCCATCACCACATCCTCCAAGGGGAGAAACAAATAATTACCAGGGTTCTGTATTGACACCTCAAACCTATGAATCAAACCACATATTTGATAGCATTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGCCTGTGTCCAACAGAAGAAGACAGTTGTTGAGGCTGAAGCTAAAGTGATACCAAATTTTGATTCATGTATGCAGCAGCATTCTGCTTATAATGCTAGATCTATATTCAATGAATTAGCTGGTTTCAATCAATCAAATCTGAGTTGCAGCCTTAACTATATGGAACAAAAAATATCAGGTGTTGGAAGACAGAGTCACGTTTATCCTAACATGAATCCATCAAGTGCCTTAAATATACCTCAACTGAAAACAGATGGAGACAAAATTCTTGAAAAGAATCACAGTTCTGGTAGCAGTTCACTATTTGGAGGAATCCCAATATGTGGTGGGAGTAATCTTTTGAGGACAAATATGAATAACTGCTCGGTTTCAAATTCTCCCAAAGTAACCACTTCTGAATTTTCTGGAACTCACAAGTTTGGGTTTGGACTTCAGAAAAACAATTCAACAACTGATGTTGGGCTCTGTTCTGTGCCTAATTTCTGTAATCAATCAGTTAACAGTCATGTGAATCTAGAAAGCTCTGGTCAGAAGAACCTTCCCATTGATTTAAAGCATGCTTGTGATTCTTTCCTTTCAACTGATGAAAGGATACATGATGATTTGCTTCAGGCCGCCCTTAAGATTCCATACCTACATCATGAGGAGCCTGTGCATGTGGGTGATAACATCCCTGGTTTTGTTCAAGATTGCCATGATAAAGATACTTCTAGTCAAAATATGGTGAAAATGAATGTTAAGCATGAAGATGCCTATACTCAGCTTCCATCAGGTGATGATCTCTTCGATGTTTTAGGTGTGGATTTGAAAAGGAGACTTCTCAATGGAAACTGGGATAAGTTGCTTGCCACTGATTCAGATGCCAACAAAGAATGTCTGGATAGAAAGGCAACATGCATGAATTTGCAAGGTGTACGGCCTGAGAATAGCTATTCAGTTAAAGATGCAATATCAGACAGTGGCATCTTCTCTGGAACAGGCACGGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAGAATTCTGATGAAATGTCTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCTGTTTCCTCTCCTGGCTGCAAGCAGGTTATGTCTGATCATGTCCGGAGGGGATTGTTTGATTTTCCTAAGACCGGGGCTAAAAGAGCTGCTGCAGAAACAAGTTCTCTTCGGTCTGGCTGCAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTTCCATATATGGTTCTAAGCTTAGTTCGTGGGTTGAGAATGGTAGTAATGTGAAACGTGAAAGCAGTGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCGAATAGGAAAAGACTTAAACCTGGAGAGAATCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAACTAAGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGCTTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGCTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCTCCTCGTCAGATGCTAGTAGAGATTCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGCTTAACCATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGACGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTAAAGGGTGGTGCATCTTCATCGAATGCAATTGATAACAACATGATGGTGTATCATTCTTTCCCACAAACTACCCAGATACCAGCAACTGTGCCTGCCAATGTGACATCCTGTGATTTACAAAAGGGAGGTCACGAGTTTGACCATCAAGCCCTTCTGTGTGGTTTCTATCAGTCTAATGCTAAATGA 2934 0.4155 MGVLLKQVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDYYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVCGLINKMMVNTSVSIAGEGIVGRAAFTGNYQWILTNNFSRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQFASLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSAKVSNERIGVPVTVDPPVVTSNCTPLAVNDSNQLTNSTLAARPVAPSPHPPRGETNNYQGSVLTPQTYESNHIFDSICQPKAHSMIKTNACVQQKKTVVEAEAKVIPNFDSCMQQHSAYNARSIFNELAGFNQSNLSCSLNYMEQKISGVGRQSHVYPNMNPSSALNIPQLKTDGDKILEKNHSSGSSSLFGGIPICGGSNLLRTNMNNCSVSNSPKVTTSEFSGTHKFGFGLQKNNSTTDVGLCSVPNFCNQSVNSHVNLESSGQKNLPIDLKHACDSFLSTDERIHDDLLQAALKIPYLHHEEPVHVGDNIPGFVQDCHDKDTSSQNMVKMNVKHEDAYTQLPSGDDLFDVLGVDLKRRLLNGNWDKLLATDSDANKECLDRKATCMNLQGVRPENSYSVKDAISDSGIFSGTGTDHLLDAVVSKAQSAPKQNSDEMSCRTTLTRVSTASVSSPGCKQVMSDHVRRGLFDFPKTGAKRAAAETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENGSNVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYELGSQSMVCPIIVEDLNPPRQMLVEILCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNAIDNNMMVYHSFPQTTQIPATVPANVTSCDLQKGGHEFDHQALLCGFYQSNAK 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01152 977 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 945 IPR043561 GO:0003700|GO:0006355
Spst11g01152 977 CDD bHLH_AtLHW_like 743 812 - -
Spst11g01152 977 MobiDBLite consensus disorder prediction 711 725 - -
Spst11g01152 977 MobiDBLite consensus disorder prediction 234 254 - -
Spst11g01152 977 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Spst11g01152 977 MobiDBLite consensus disorder prediction 711 753 - -
Spst11g01152 977 MobiDBLite consensus disorder prediction 729 753 - -
Spst11g01152 977 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 739 788 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01152 Spst-Chr11 35869797 35876225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01152 541 951 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.278 5.53e-119 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01152 - - gmx:100786351 1578.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00681 5 5852259 5857351 Spst11g01152 11 35869797 35876225 PCT