Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01143 ATGGACGTTGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGTGGTGCAGAACCATGCCGAAAGAGACCAGTTAGGAGAGTCGCAGACTCCGACTCCGCCGCCGTTGTCGACGGGAGGGGGATCTCCGGCTCAGTCACCATCGCAACAGCAGCAGCCGGCGACGGCGGCTCAGGTGCAGCATAGTCCGGTGGTTGGTCCGAGGCTCGCGCCGACTTACTCAGTGGTGAATGCAATTTTGGAGAAGAAGGAGGACGGGCCAGGACCGCGGTGCGGCCACACGTTGACGGCTGTGGCGGCCGTCGGAGAGGAGGGGACGTCGGGGTACATTGGTCCAAGGCTGATTTTGTTCGGTGGTGCCACTGCGCTTGAAGGGAATTCCGCGGCGTCAGGGACTCCTTCATCCGCTGGAAATGCTGGCATACGTATGTATTTTATTCCCTTTTCGTCTTTTCGTGAAGGCAATAACACGAAGGCTTCGATTGCGTTGTTGATTAAGTTACATCTTCACCAATTGCTGGATTGGGGCAATGAACCCCATTCCTTTTCTGTGGATTATGGAATATTGTCGTTGTCTGAAGCTATGAAGCTCAGATACATGAAAAAACGTGCTTCTCTTGCTGTTGTATGTTTAGCTGGAGCCACCGCTGATGTCCACTGTTATGATGTCATAACTAATAAATGGTCTAGGATAACTCCTATAGGTGAGCCTCCAACCCCTAGGGCTGCACATGTGGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCTGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAACGACCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTAATGGCTATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCTTTAGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGTTCTGATGGGCTTCTTCTGCTATGTGGAGGGAGGGATGCCAATAGTGTTTTTGTCATTGATATCACTCTTATTTCCATTTTTGCCCTTGGGGCTTGCCTATATGGTGGCCCATCCACTTTTCTTAAGCTACTAAGAGAAGTAAACTGGGGCAAGGATGAGCCATTGGCTAGTGCATATGGACTTGCCAAGCATCGAGATGGTCGTTGGGAATGGGCCATTGCTCCTGGTGTCTCACCATCTCCGAGATATCAACATGCAGCAGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGAGGAGGACGGATGGTTGAAGATTCGTCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACTGGAAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAGTTGACTAGGCGGTGTAGGCATGCTGCTGCTGCTATTGGTGACTTAATTTTCATTTATGGTGGTTTACGTGGCGGGGTCTTGCTGGACGATTTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAGCTGCTGCTTCACATGCAGCAGCAGCAGCTGCATCTAATGTTCAAGCTGGACGATTACCTGGACGTTATGGTGGATTTGTTGATGATAGGACGAGGCAAACCATGACTGAAGCAGCTCCTGATGGTGCAGTTGTTTTGGGAAATCCAGTTGCGCCCCCTGTAAATGGGGACATATATACTGATATCAGCACTGAAAATGCCTTGCTCCCAGGATCTAGGCGAACAAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATTAGTGCCACACTGGCTGCCGCCAAAGCACGGCAAGTAAATGGGGAAGTTGAATTGCCTGACCGAGATCGTGGGGCTGAGGCAACACCTAGTGGGAAACAAATATCTTCCTTGATTAAGCCTGATTCTTCTGCGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTTGTTGTTGCTGCAGAGACTGGTGGAGCATTGGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCTGAAAGTGCAACAGCTGCTAGGAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTTGTAGCTCACCTCTTAAAGCCACGTGGCTGGAAACCACCAGTTCGGCGACAGTTTTTCTTGGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGAATATTTTCAAGTGAACCGAGTGTTTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCGTCAACTGCTGGTGACATAGCATACATCGACTATCTATTCCTCGGAGATTATGTTGATAGGGGTCAACACAGCCTGGAAACTATTAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGACATTAATGCCCTTTTTGGTTTCCGAATAGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGAATAAACCGTCTGTTTAATTGGCTCCCTCTGGCAGCTCTGATAGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAACCATGTGGAACAAATTGAGAATATTCAGCGCCCAATTACAATGGAAGCAGGATCAATTGTGCTCATGGATCTATTGTGGTCTGACCCTACAGAGAATGACAGTGTGGAAGGGCTGCGGCCAAATGCTAGGGGTCCAGGATTAGTTACATTTGGGCCTGATCGGGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGATTTGCCCAGGGACATTTGATCACACTTTTCTCTGCGACAAACTACTGTGGTACCGCAAATAATGCTGGGGCGATTTTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCAGCAATTTCTTCCCCAGAAACTTCACCTGAGCGACATATTGAGGACACATGGATGCAGGAGTTAAATGCCAACAGACCACCAACGCCAACTAGAGGCCGTCCTCAAGTAACAAATGACAGAGGTTCTCTTGCTTGGATATAG 3333 0.4848 MDVDSSMVPETDHDPVVQNHAERDQLGESQTPTPPPLSTGGGSPAQSPSQQQQPATAAQVQHSPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRMYFIPFSSFREGNNTKASIALLIKLHLHQLLDWGNEPHSFSVDYGILSLSEAMKLRYMKKRASLAVVCLAGATADVHCYDVITNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVFVIDITLISIFALGACLYGGPSTFLKLLREVNWGKDEPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAASNVQAGRLPGRYGGFVDDRTRQTMTEAAPDGAVVLGNPVAPPVNGDIYTDISTENALLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSSASNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01143 1110 PIRSF STPPP_BSU1 398 1110 IPR012391 GO:0004721|GO:0009742
Spst11g01143 1110 PIRSF STPPP_BSU1 30 379 IPR012391 GO:0004721|GO:0009742
Spst11g01143 1110 Gene3D - 72 382 IPR015915 GO:0005515
Spst11g01143 1110 MobiDBLite consensus disorder prediction 23 60 - -
Spst11g01143 1110 MobiDBLite consensus disorder prediction 671 691 - -
Spst11g01143 1110 CDD MPP_Bsu1_C 759 1061 IPR041758 -
Spst11g01143 1110 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 203 375 - -
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 875 899 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 842 869 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 913 939 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 1025 1041 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 807 834 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 943 970 IPR006186 GO:0016787
Spst11g01143 1110 PRINTS Serine/threonine phosphatase family signature 1003 1023 IPR006186 GO:0016787
Spst11g01143 1110 MobiDBLite consensus disorder prediction 1086 1101 - -
Spst11g01143 1110 MobiDBLite consensus disorder prediction 654 692 - -
Spst11g01143 1110 Gene3D - 743 1082 IPR029052 -
Spst11g01143 1110 Pfam Kelch motif 437 483 IPR011498 GO:0005515
Spst11g01143 1110 Pfam Galactose oxidase, central domain 294 347 - -
Spst11g01143 1110 MobiDBLite consensus disorder prediction 1 63 - -
Spst11g01143 1110 SUPERFAMILY Kelch motif 214 540 IPR015915 GO:0005515
Spst11g01143 1110 SMART pp2a_7 779 1063 IPR006186 GO:0016787
Spst11g01143 1110 FunFam Serine/threonine-protein phosphatase 743 1083 - -
Spst11g01143 1110 MobiDBLite consensus disorder prediction 1086 1110 - -
Spst11g01143 1110 SUPERFAMILY Metallo-dependent phosphatases 765 1070 IPR029052 -
Spst11g01143 1110 FunFam Serine/threonine-protein phosphatase 420 563 - -
Spst11g01143 1110 Gene3D - 405 567 IPR015915 GO:0005515
Spst11g01143 1110 Pfam Calcineurin-like phosphoesterase 807 1014 IPR004843 GO:0016787
Spst11g01143 1110 ProSitePatterns Serine/threonine specific protein phosphatases signature. 876 881 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01143 Spst-Chr11 35748891 35762974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01143 771 1006 Calmodulin-binding Proteins AT5G63870 29.044 1.02e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01143 - - gmx:100788485 1702.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01143 11 35748891 35762974 Spst11g01143 11 35748891 35762974 ECH
Spst5g00693 5 5996601 6008338 Spst11g01143 11 35748891 35762974 PCT