Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01120 ATGGATTCAGATCCAATTGGGAGCTTCTTCCTGCACAAGCCTATTGTTCTAAACTCTTTCCCTGAGGATACAAACCACCCAAAGTGGAAACATAGTCCCCACAACAACATGGACTCCATTGCTAGAGCCAAATACACCATCCCCTTCCAAGTCAACTTTAGCTGTTCTCCAAACGATCGTGACTCTTCCCCACCACCCCACCACAGCAGAACCGAGATGGACTTCTTCTCCGACGACAACAACAACAACAACAACAAAAAAGAGGACAAAGGTTCCACTTCTGCCTCTGATCATCGTCATTCCGCCACTCTACCTACGTTGGAATTCGAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACTAGCAGTGATCAATCTATGGTGGATGATGAGACATCACCCAATTCAGAAGACAAAAGAGCTAAGGATGAGGTAAAGATCGATAGATATCTTGCTGTTGTTCAAGCTGAGCTCGAGAGAATGAAGAGGGAGAATCAAACGTTGAGGGACTCGCTTGATCAGATTAACGCCAATTACAATGCACTTCATATGCATTTTATGAGTTTGATGCAGCAGCAGAAGGCCGCGGAAGTTGAAGAACAAGAAGTGCTTGGTGGAAAGTTAGAAGGGAATAAGGGTGAGAGTGCTGGGGTATTGGTGCCAAGACAGTTCATGGATCTTGGATTGGCTACTAATGCTGACACTGATGAACCCTCGTCTTCATCAGGGGGAAGAAGTCAAGATCGATCAGCATCACCTAGCGCAGAAGTGGCTTCCAAGGAAGTAGGGACCAGTAAGAATGGGAATGTTAATGATGAAGGGGATGATGGAGAGGATAATCCCTCAGGTGGTCATGCTCATGCTGGTGATAAAGTTCCAAGGTTGAGTCCTTCAAAGAATAATGTTGATCAGGCTGAGGCAACCATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAAGCACCCATGATCACTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGGTGTACCATGGCTACTGCTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACCGAACAATCCTCGTCACAACCTATGAAGGCAATCACAACCACCCTTTGCCTCCAGCAGCTGTGGCAATGGCACAAACCACTTCCTCAGCAGCAAAAATGCTTCTTTCTGGGTCAATGTCTAGTGCTGACGGCCTAATGAATGCAAACTTCCTTGCAAGGACACTCCTCCCTTGCTCTTCAAGCATGGCTACTATCTCGGCATCTGCTCCATTCCCAACTGTTACATTGGACCTAACACAATCTCCAAACCCTCTACAGTTCCCAAGGCACCCAAACCAGTTACAAATTCCCCTCCAAGGTGTCCCTCAGAATTTTGCAAACTCCCCAGCCTCTTTCATGCCTCAGATATTTGGACAAGCACTCTACAACCAATCAAAGTTTTCTGGTCTTCAAACGTCACATGATGCAGACCCTTCACAATTTGGTAACAACTCTCAGCAGTTACCATCACACGTTACTGACACAGTTAGTGCTGCCATTGCTGCTGATCCAAACTTCACTGCAGCTCTGGCAGCAGCTATCACTTCCATTATTGATGGTGCTCAGCAACGCAACAACAGTAACAATACTAACAATAATGGCAACATGACAGCCAGCACCAGCAATGGCAACACCAGCAACGCAAAGCAATAA 1743 0.4618 MDSDPIGSFFLHKPIVLNSFPEDTNHPKWKHSPHNNMDSIARAKYTIPFQVNFSCSPNDRDSSPPPHHSRTEMDFFSDDNNNNNNKKEDKGSTSASDHRHSATLPTLEFEVNTGLNLLTTNTSSDQSMVDDETSPNSEDKRAKDEVKIDRYLAVVQAELERMKRENQTLRDSLDQINANYNALHMHFMSLMQQQKAAEVEEQEVLGGKLEGNKGESAGVLVPRQFMDLGLATNADTDEPSSSSGGRSQDRSASPSAEVASKEVGTSKNGNVNDEGDDGEDNPSGGHAHAGDKVPRLSPSKNNVDQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMATACPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAVAMAQTTSSAAKMLLSGSMSSADGLMNANFLARTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRHPNQLQIPLQGVPQNFANSPASFMPQIFGQALYNQSKFSGLQTSHDADPSQFGNNSQQLPSHVTDTVSAAIAADPNFTAALAAAITSIIDGAQQRNNSNNTNNNGNMTASTSNGNTSNAKQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01120 580 FunFam probable WRKY transcription factor 31 311 388 - -
Spst11g01120 580 MobiDBLite consensus disorder prediction 553 580 - -
Spst11g01120 580 Coils Coil 152 179 - -
Spst11g01120 580 MobiDBLite consensus disorder prediction 55 144 - -
Spst11g01120 580 SUPERFAMILY WRKY DNA-binding domain 319 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst11g01120 580 SMART WRKY_cls 326 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst11g01120 580 MobiDBLite consensus disorder prediction 499 520 - -
Spst11g01120 580 Pfam WRKY DNA -binding domain 328 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst11g01120 580 ProSiteProfiles WRKY domain profile. 321 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst11g01120 580 MobiDBLite consensus disorder prediction 234 271 - -
Spst11g01120 580 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 113 560 IPR044810 GO:0003700
Spst11g01120 580 MobiDBLite consensus disorder prediction 232 320 - -
Spst11g01120 580 MobiDBLite consensus disorder prediction 97 131 - -
Spst11g01120 580 Gene3D WRKY domain 311 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst11g01120 580 MobiDBLite consensus disorder prediction 63 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01120 Spst-Chr11 35541549 35544408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01120 72 562 WRKY Transcription Factor Family AT1G62300 50.682 3.22e-131 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst11g01120 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01120 - - gsj:114417328 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01120 11 35541549 35544408 Spst6g01208 6 11063700 11066049 ECH
Spst11g01120 11 35541549 35544408 Spst11g01120 11 35541549 35544408 ECH
Spst5g00720 5 6247622 6250206 Spst11g01120 11 35541549 35544408 PCT