Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01119 ATGGAGTGGCAAAGAGGCCACACCATAGGCCAGGGCTCGTCAGCCACCGTCTCCACCGCCACTTGCCGCACCGGTGGCGGTGTCTTTGCTGTGAAGTCATCGGAGCTGTCTCAATCAGAGTCTTTGAAAAGGGAGCAAAAAATTTTGTCCTCTCTAAGTAGTCCTTATGTGGTTGCGTACAAAGGGTGTGACATTACCATGGAGAACAACAGGCTCTTGTTCAACCTCTTCATGGAGTACATGCCCTTTGGCACGGTTGCTCAGGCGACTCACCGGCACGGTGCCCGGCTCGAGGAGGCGGCTTTGGCACGCTACACGAGGCAAATTTTGCAGGGGCTAGAGTACTTGCATTCAAAAGAACTGGTGCATTGTGACATCAAGGGTGCTAATATCTTAATTGGTGAAGATGGGGTAAAAATTGGTGACTTGGGGTGTGCCAAGACTGTGGTGGATTCCGCGGTGGTGATCGGTGGCACTCCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGGAGCAAGGGTGTGCTAGTGACATTTGGTCACTTGGGTGCACTGTGGTTGAAATGGCCACAGGTGGTGCACCATGGCCTAATGTGGAAGACCCTTTTTCAGTGCTTTATCATATCGCATATTCTAGTGAAGTGCCTGAGATTCCTTGTTTTCTATCTAAGGAAGCAAAGGATTTCTTGGGGAAGTGCTTGAGGAGGAATCCACAAGAGAGGTGGAGGGCTAGTGAACTTTTGAAGCACCCATTTATTGGAAAATTATGTTCCAATAATAAGGAAGGTTTGGAATCTGATTCAAGTTCCCCAACTAGTGTTCTTGAGCAAGGCTTTTGGAGCTCCGTGGAAGAGTCAGAAAGTGTTGGCAATTTGATTAACAGCACAAGAAAATTTGAATTTTTGGCTGCTGGGAGGGTCAGAATGTTGGCTCTGTCTTCTGGGGCACCCTGTTGGGCACAACATGATGATGATGATGATGATGATGATGATGATGATGATGATGAGAATTGGATCACAGCCAGACGGAACGGAGTGAAAGGTTTTGGCAATTGTGGGTCAGGGACAGTTTCTGCTAGTCATGAGTTGTCTCACTAG 1098 0.49 MEWQRGHTIGQGSSATVSTATCRTGGGVFAVKSSELSQSESLKREQKILSSLSSPYVVAYKGCDITMENNRLLFNLFMEYMPFGTVAQATHRHGARLEEAALARYTRQILQGLEYLHSKELVHCDIKGANILIGEDGVKIGDLGCAKTVVDSAVVIGGTPMFMAPEVARGEEQGCASDIWSLGCTVVEMATGGAPWPNVEDPFSVLYHIAYSSEVPEIPCFLSKEAKDFLGKCLRRNPQERWRASELLKHPFIGKLCSNNKEGLESDSSSPTSVLEQGFWSSVEESESVGNLINSTRKFEFLAAGRVRMLALSSGAPCWAQHDDDDDDDDDDDDDENWITARRNGVKGFGNCGSGTVSASHELSH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01119 365 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Spst11g01119 365 SUPERFAMILY Protein kinase-like (PK-like) 3 275 IPR011009 -
Spst11g01119 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Spst11g01119 365 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01119 365 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 344 - -
Spst11g01119 365 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Spst11g01119 365 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01119 365 CDD STKc_MAPKKK 2 253 - -
Spst11g01119 365 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Spst11g01119 365 Pfam Protein kinase domain 4 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01119 Spst-Chr11 35522432 35523529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01119 1 344 MAP Kinase Kinase Kinase AT1G05100 49.435 1.18e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst11g01119 Pkinase 6.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01119 K20716 - gmx:100794648 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01119 11 35522432 35523529 Spst6g01205 6 11042786 11046969 ECH
Spst11g01119 11 35522432 35523529 Spst11g01119 11 35522432 35523529 ECH
Spst11g01119 11 35522432 35523529 Spst3g03236 3 82359403 82360332 ECH
Spst5g00723 5 6264390 6265568 Spst11g01119 11 35522432 35523529 PCT