Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01103 ATGGCCGCAGCAACAGCGACACCTTCGACCACTCTCTCCAAACCCTCCTCTCTCCCTTTCAACCACACTCGCGCTTTCCCCAAAACACTCCCAATATTCCCCTCCCCCCCTCGCCCCGCCGTCAAACCCCTCTTCCTCGTATCCTCCAAAAACCCCCTTTCCGATGTTCTCCCCGTCCAACGCGCAGAAGACAGCGCGTGGGAGGACGAGAAGCCGCGTGAAGAGTGCGGCGTCGTCGGCATCTATGGCGACCCTGAGGCCTCCCGCCTCTGCTACCTTGCCCTCCATGCTCTCCAGCACCGCGGCCAGGAAGGCGCCGGAATCGTAACCGTCCACGACAACGTCCTCCAATCCGTCACCGGCGTGGGCCTCGTCTCCGACGTCTTCAACCAGTCCAAGCTCGACCAGCTCCCCGGCAGCCTCGCCATCGGCCACGTCCGCTACTCCACTGCCGGCCAATCCATGCTCAAAAACGTCCAGCCCTTCGTCGCCGGTTACCGGTTCGGCTCCGTCGGCGTCGCCCACAACGGTAACCTCGTCAACTACCGCACCCTCCGCTCCAACCTCGAGGACTCGGGCTCCATCTTCAACACCACCTCCGACACCGAGGTCGTCCTCCACCTCATCGCCACCTCCAAGCACCGCCCATTCATCCTACGCATCGTCGACGCCTGCGAGAAACTCAAGGGTGCCTATTCAATCGTCTTCGTCACCGAGGACAAACTCGTTGCCGTTCGCGACCCCTTCGGGTTCCGTCCCCTCGTCATGGGCAGGAGAAGCAACGGCGCGGTTGTATTCGCCTCGGAAACCTGCGCCCTCGATTTGATCGAAGCCACTTACGAGAGGGAGGTTTTTCCCGGCGAGGTTCTCGTGGTGGACAAAAACGGTGTTCAGAGTCTCTGCCTCATGTCCCATCCTCAACCCAAGCAATGCATTTTCGAGCATATATACTTCGCGCTTCCCAATTCGGTTGTTTTCGGGAGGTCTGTGTACGAGTCCCGCAGAAGATTCGGGGAGATTTTAGCCTCTGAGAGTCCCGTCGATTGTGATGTTGTGATTGCTGTTCCTGATTCTGGGGTTGTAGCGGCTCTTGGGTATGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGTTTGATTAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTCGGTGTGAAACTCAAGCTCTCACCCGTGCGTGCTGTGCTTGAGGGTAAACGTGTGGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCATCCAAGATTGTTAGGTTGTTGAAGGAGGCTGGTGCCAAGGAGGTTCACATGAGGATTGCTAGTCCTCCCATTATTGGGTCTTGTTATTATGGGGTTGATACTCCCAGTTCAGAAGAGTTGATTTCAAATAGAATGAGTGTGGAAGAGATAAGGGATTTCATTGGGTCGGATTCGCTGGCCTTTTTGCCCTTTGATAGCTTGAAGAAGTTGCTGGGAAGTGATAGTCCTAATTTCTGCTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGCCTACAGAGCTAAAGGTGAAGAGGGTTGGGGACTTCGTGGATGATGGCTTGAATGGGAGCTTGGAGTCCATTGGTGGTGGTTGGGTTCAAGCCAACCGAAACCAAATCAAGGTTGGTAGTTAG 1680 0.5542 MAAATATPSTTLSKPSSLPFNHTRAFPKTLPIFPSPPRPAVKPLFLVSSKNPLSDVLPVQRAEDSAWEDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHDNVLQSVTGVGLVSDVFNQSKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRSNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLKGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEILASESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKKLLGSDSPNFCYACFSGNYPVEPTELKVKRVGDFVDDGLNGSLESIGGGWVQANRNQIKVGS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01103 559 CDD PRTases_typeI 338 449 IPR000836 -
Spst11g01103 559 MobiDBLite consensus disorder prediction 1 20 - -
Spst11g01103 559 Pfam Glutamine amidotransferase domain 154 273 IPR017932 -
Spst11g01103 559 Hamap Amidophosphoribosyltransferase [purF]. 75 516 IPR005854 GO:0004044|GO:0009113
Spst11g01103 559 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 76 517 IPR029055 -
Spst11g01103 559 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 76 299 IPR029055 -
Spst11g01103 559 NCBIfam amidophosphoribosyltransferase 76 517 IPR005854 GO:0004044|GO:0009113
Spst11g01103 559 CDD GPATase_N 76 326 IPR035584 -
Spst11g01103 559 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 76 295 IPR017932 -
Spst11g01103 559 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 74 523 - -
Spst11g01103 559 Pfam Phosphoribosyl transferase domain 350 445 IPR000836 -
Spst11g01103 559 PIRSF Pur1 72 530 IPR005854 GO:0004044|GO:0009113
Spst11g01103 559 Gene3D - 335 499 IPR029057 -
Spst11g01103 559 SUPERFAMILY PRTase-like 311 522 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01103 Spst-Chr11 35368035 35369714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01103 51 549 PRT Gene Family AT4G34740 84.200 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01103 K00764 - gmx:100791919 1002.66