Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01095 ATGCCCTCGATTATAACAGGGAACAACAACTTTAGTGGGTTTGGATCATCTTCATCTTTCACTCTTGCCCAGCCAAACCTGATGGAAGCGTTGGAGATGGGTCAAAACACTTCAGAGAGTGAGGTCCCTCGAATCCGCGAAGATGAGTTCGACAGTGCCACCAAGTCTGGTAGTGAAAACCATGAAGGTGCCTCTGGTGAGGACCAAGACCCTCGTCCCAACAAAAAGAAGCGTTACCACCGCCATACCCAACACCAGATCCAGGAAATGGAAGCATTCTTCAAGGAGTGTCCGCACCCAGATGACAAGCAAAGGAAAGAACTGAGCAGGGAATTAGGGTTAGAGCCATTGCAGGTTAAGTTTTGGTTTCAGAACAAGCGTACCCAGATGAAGACACAACATGAGCGGCATGAGAATACACAGCTTAGAACCGAGAACGAGAAGCTTCGAGCAGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCTTCGTGTCCTAATTGTGGTGGACCAACCGCTATAGGAGAAATGTCATTTGATGAACATCACTTGAGGCTTGAAAATGCAAGGCTAAGAGAAGAGATTGATAGGATTTCTGCAATTGCTGCGAAGTATGTAGGGAAGCCTGTGGTGAATTATTCAAATATTTCCCCTTCTCTCCCTCCTCGTCCTCTAGAACTTGGGGTTGGTGCTGGTTTTGGAGGCCAGCCAGGAATTGGTATGGACATGTATGGAGCTGGGGATCTTCTCAGATCAATTAGTGGACCCACGGAAGCTGATAAACCAATAATAATAGAGCTAGCTGTTGCAGCTATGGAGGAGCTCATTGGAATGGCTCAGATGGGTGATCCTCTTTGGTTAACTACCCTTGATGCCACATCCACTATGCTCAATGAGGATGAATACATCAGGTCCTTCCCTCGAGGAATTGGCCCCAAACCTACTGGCTTCAAATGTGAAGCTTCTCGAGAAACTGCTGTTGTTATCATGAACCATGTCAGCCTCGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAGTTTTCTCTGGTATAGTCTCAAGAGCCATGACCCTGGAAGTACTATCAACAGGGGTGGCCGGGAACTACAATGGTGCCTTACAAGTGATGACAGCAGAATTGCAACTACCAACACCTCTTGTGCCAACTCGTGAGAGTTATTTTGTAAGGTATTGTAAACAACATTCAGATGGGACTTGGGCAGTTGTGGATGTGTCTTTGGATAATTTGCGCCCTAGCCCTTCAGCTAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCAAATGGATATTCAAAGGTCACATGGGTTGAGCATGTGGAAGTGGACGACAGAGGTGTTCATAATCTTTACAAACAGCTTGTTAGCTCTGGACATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTAGATCGACAATGTGAAAGACTCGCTAGTGCCATGGCAACAAACATTCCCACTGTTGATGTTGGTGTGATAACAAACCAAGAGGGGAGAAAGAGCATGATGAAGCTGGCTGAAAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCATCCACTGCTCACACATGGACAACACTGTCTGGGACTGGTGCTGATGATGTAAGGGTGATGACCCGAAAGAGTGTGGATGACCCTGGAAGACCCCCTGGCATCGTTCTCAGTGCTGCCACTTCTTTTTGGCTTCCAGTTCCACCTAAACGAGTTTTTGACTTTCTCCGTGACGAGAACTCTAGGAATGAGTGGGACATTCTTTCCAATGGAGGAGTTGTGCAAGAAATGGCACACATTGCAAATGGACGAGATACTGGAAACTGCGTGTCTCTACTTCGAGTAAATAGTGCAAATTCAAGCCAGAGCAACATGTTGATACTACAAGAGAGTTGCACCGATTCAACAGGGTCTTTTGTCATTTATGCTCCGGTGGATATTGTTGCAATGAATGTAGTTTTAAATGGAGGAGACCCGGATTATGTGGCACTTCTTCCTTCAGGGTTTGCAATTCTTCCAGATGGAACCGTATCTCATGAAACTGGACCTGGTGGATCTCTTTTAACTGTTGCGTTTCAAATACTGGTTGATTCGGTTCCAACCGCTAAGCTTTCTCTTGGATCTGTTGCCACTGTCAACAATCTCATTGCATGTACTGTTGAGAGAATCAAGGCTTCTTTGTCTGGTGAACCTGTTTGA 2223 0.4593 MPSIITGNNNFSGFGSSSSFTLAQPNLMEALEMGQNTSESEVPRIREDEFDSATKSGSENHEGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPLELGVGAGFGGQPGIGMDMYGAGDLLRSISGPTEADKPIIIELAVAAMEELIGMAQMGDPLWLTTLDATSTMLNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMNHVSLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTVSHETGPGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEPV 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01095 740 Pfam Homeodomain 76 131 IPR001356 GO:0003677
Spst11g01095 740 ProSiteProfiles START domain profile. 257 489 IPR002913 GO:0008289
Spst11g01095 740 SMART START_1 266 486 IPR002913 GO:0008289
Spst11g01095 740 CDD homeodomain 76 134 IPR001356 GO:0003677
Spst11g01095 740 Gene3D - 62 150 - -
Spst11g01095 740 MobiDBLite consensus disorder prediction 41 74 - -
Spst11g01095 740 ProSiteProfiles 'Homeobox' domain profile. 73 133 IPR001356 GO:0003677
Spst11g01095 740 MobiDBLite consensus disorder prediction 32 84 - -
Spst11g01095 740 SUPERFAMILY Bet v1-like 505 732 - -
Spst11g01095 740 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 735 IPR042160 -
Spst11g01095 740 Coils Coil 139 159 - -
Spst11g01095 740 Pfam START domain 267 486 IPR002913 GO:0008289
Spst11g01095 740 SUPERFAMILY Bet v1-like 257 488 - -
Spst11g01095 740 Gene3D - 314 483 IPR023393 -
Spst11g01095 740 ProSitePatterns 'Homeobox' domain signature. 108 131 IPR017970 GO:0000981|GO:0006355
Spst11g01095 740 FunFam Homeobox-leucine zipper protein GLABRA 2 266 485 - -
Spst11g01095 740 SUPERFAMILY Homeodomain-like 65 133 IPR009057 -
Spst11g01095 740 FunFam Homeobox-leucine zipper protein HDG1 63 149 - -
Spst11g01095 740 CDD START_ArGLABRA2_like 261 485 - -
Spst11g01095 740 SMART HOX_1 74 137 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01095 Spst-Chr11 35285972 35291036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01095 45 738 Homeobox Transcription Factor Family AT1G05230 81.143 0.0 1167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Spst11g01095 START 1.3e-59 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01095 K09338 - gmx:100782260 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01095 11 35285972 35291036 Spst11g01095 11 35285972 35291036 ECH
Spst5g00748 5 6534169 6539552 Spst11g01095 11 35285972 35291036 PCT