Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01087 ATGTCTGAATTCGAAACAAACATCCCAACTACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCGGGGACTAAAGAGTATGTTCATGTTCGTGTACAACAACGTAACGGAAGGAAAAGCCTAACAACTGTTCAAGGATTAAAGAAAGAGTATAGCTATAGCAAAATACTCAAGGATCTGAAGAAAGAATTCTGCTGTAATGGTACAGTTGTCCAAGACCCTGAGTTGGGCCAGGTTATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATAGTAAAGAAGGAACATATCAAGCTTCATGGTTTCTAA 342 0.4064 MSEFETNIPTTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKLHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01087 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Spst11g01087 113 SUPERFAMILY eIF1-like 8 113 IPR036877 GO:0003743|GO:0006413
Spst11g01087 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Spst11g01087 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Spst11g01087 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Spst11g01087 113 NCBIfam translation initiation factor SUI1 8 113 IPR005874 GO:0003743
Spst11g01087 113 Gene3D - 1 113 - -
Spst11g01087 113 MobiDBLite consensus disorder prediction 1 23 - -
Spst11g01087 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Spst11g01087 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01087 Spst-Chr11 35179926 35180708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01087 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 88.496 1.48e-74 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01087 K03113 - gmx:100784390 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01087 11 35179926 35180708 Spst11g01087 11 35179926 35180708 ECH