Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01079 ATGGAGTTTGACCTTCAAAACCCTTTGTCAAATCTTCACTCCGATGCCGTCTCTTACCTCTTCCTCCTTGAATCTGACCACACCCCATCACAGAATCACTCTCACACTCTCAAAGCCAGAGATCTTGACATCTCTGCCAGAAGAGAACTTGTTTCCCTAATCTCACAGTTATCCTGCACTTTGGATCCGGTTTTGTCTTACCTTGCTATCAACTACCTGGATCGGTTCTTAGCCAGACAAGGCATTTTGAAACCGAAGCCATGGACCCTCAGGCTCATTGCTGTCTCATGCATTTCGCTAGCTATGAAGATGATGAGAACTGAATGCCCTGATGTCCAGGCCCTTCTGAGTCAAAGTGATGGGGGCATCATCTTTGAGACGCAAACGATAAGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGATCGATAACCCCATTCTCTTTCATAACTTTCTTCATTGCCTTGATGGGGCTCAAAGACTCGCCAATGGGGACGGTTCTGAAAAACCGTGCCTCTGAAATCATATTTATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATAATTGCATCATCTGCCCTTCTGTGTGCTTCCCATGAGTTGTTTCCTTTTCAATATCCCTCCTTCTTAAAAGCAATATCCGATTCTTCTGATGTTGATAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACGCCGATTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAAACCAACGGAATCACCGTTTCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGAAGGAAAATCACTCCTTGTGGAAACAATCCAACGATCCACAATTCTTGGATTAACTAA 942 0.4406 MEFDLQNPLSNLHSDAVSYLFLLESDHTPSQNHSHTLKARDLDISARRELVSLISQLSCTLDPVLSYLAINYLDRFLARQGILKPKPWTLRLIAVSCISLAMKMMRTECPDVQALLSQSDGGIIFETQTIRRMEALILGALQWRMRSITPFSFITFFIALMGLKDSPMGTVLKNRASEIIFMSQREIRLWEFKPSIIASSALLCASHELFPFQYPSFLKAISDSSDVDKESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKTNGITVSDSPLRQERDLKRRKITPCGNNPTIHNSWIN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01079 313 Pfam Cyclin, C-terminal domain 148 247 IPR004367 -
Spst11g01079 313 FunFam D6-type cyclin 30 142 - -
Spst11g01079 313 Gene3D - 20 237 - -
Spst11g01079 313 SUPERFAMILY Cyclin-like 129 244 IPR036915 -
Spst11g01079 313 SMART cyclin_7 48 139 IPR013763 -
Spst11g01079 313 FunFam D6-type cyclin 143 237 - -
Spst11g01079 313 CDD CYCLIN_AtCycD-like_rpt2 148 239 - -
Spst11g01079 313 SUPERFAMILY Cyclin-like 12 145 IPR036915 -
Spst11g01079 313 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Spst11g01079 313 SMART Cyclin_C_2 148 261 IPR004367 -
Spst11g01079 313 Gene3D - 30 146 - -
Spst11g01079 313 PANTHER CYCLINS 16 250 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01079 Spst-Chr11 35068222 35069875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01079 1 295 Core Cell Cycle Gene Families AT4G03270 43.810 2.02e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01079 K18812 - gmx:100820404 509.99