Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01070 ATGGACAACGACGACGGTCCTGAGAGAATGGCATCCATTTTCATGTTGATGACTTTGAATTTGAAACTGCATAGACCTGCGAACAAAACGAACATGGCAAGGCCAAACTCCAACCATGCCATAATCATCGTTCAATTCCTACGTCTGAGGAAAACTAGACGTCCATTTGAAAGAAAGACAAAAGCTGCGCTACAACCCTACATAAATTTCCAGGCCAAAAGACGCGACCGGGTCATTAATTGGACCCATTCCACGTTCCTTCCCTTCACACACAACCCCACCAAGCACATAATATCTACCTTCGTTAACTTCTCTCATTTTCCCTGTGGAACCAACCAAACCATTAGCAACATGAGGAACAAGAAACCATCGTTGTTATGGCTTTCTCTCTTCATCACATGCTTCTTATCTTTCCACTCCTACACATCACTCGCAGTTTTGACCACCATCTCAGCAAATCAATCTCTCTCTGTGGATCAAACTCTTGTCTCTCAAGAGGGCCACTTTGAATTGGGTTTCTTCTCCCCAGGTAACAACTCTAAATACTATATAGGCATGTGGTACAGAAAGATATCTCAGAGGACTTATGTTTGGGTAGCAAATAGAGACAACCCAGTTTCTGATAAGAATTCTGCTAAATTAACAATATTGGATGGTAACTTAGTGGTCTTAGACCAGTCCCAAAGTATAGTTTGGTCAACGAATTTGAGTTCTCCTAGCTCAGGTTCTGTGGTAGCTGTGCTTCTAGATTCTGGGAATCTTATATTAAGCAATAGGCCTAATGCATCAGCAACTGACGCTATGTGGCAGAGTTTTGATCACCCCACAGATACGTGGCTTCCCGGTGGCAAGATAAGATTGGACAACATAACAAAGAAGCCACAGTATCTCACTTCATGGAAGAATCTTGAAGATCCTGCAACCGGTTTGTTCTCTCTTGAACTAGACCCTGCAGGAAGTACTGCATATTTGATTCTTTGGAATAAAACTGAGCTGTATTGGTCAAGTGGTGTTTGGAATGGACAGATTTTCAGCTTGGTTCCTGAGATGAGGCTAAACTACATCTACAATTTCACCTTTGAGTCCAATGAGAACGAGAGCTACTTCACTTACTCCTTGTATAACAGCTCTATTATATCTCGCTTTCTTATGGATGTCTCGGGGCAGATCAAGCAACTTACATGGCTGGATAATGCTCAGCAATGGAATTTGTTCTGGTCTCAGCCTAAGCAACAGTGCGATGTCTATGCCTTCTGTGGTGGATTTGGGAGCTGCACTGAGAATGCCATGCCATATTGTAATTGTTTGACTGGTTATGAACCAAAGTCGCAATCTGATTGGAATCTTACGGATTACTCAGGAGGGTGTGTGAGAAAGACAGAATTGCAATGTGGCTCACCAAATTCCTCTAACAAGGACAAGGACAGGTTCCTTCCAATTCTCAACATGAAATTGCCTAATCATTCACAATCCATAGGAGCTGGGAATGTCGGGGATTGTGAAGCAAAATGCTTGAGTAACTGTTCTTGTACTGCATATGCTTATGGCAATAGTGGTTGTTTAATTTGGTATGGTGATCTCTTGAACCTGCAACAGCTTACTCAAGATGACAGTAGTGGGCAGACTTTGTTTCTCAAACTTGCAGCATCTGAGTTTCATGATTCTAAAAGCAATAAAGGGACATTCATTGGTGCTGTTGCTGGAGCTGTTGGTGGTGTGGTGGTTCTTCTAATTGTTTTTGTGATTGTGATGCTGCGGCGCAGAAAGAGACATGTTGGGACAGGAACATCTGTGGAGGGCTCATTGGTGGCATTTGGGTATAGGGATTTGCAGAATGCCACGAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGCTTTGGCTCTGTTTTCAAAGGAACATTGCCTGATTCAAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGGGAGAAGCAGTTCAGAACCGAAGTGAGTACAATTGGGACAGTTCAACATGTCAACCTTGTAAGGCTTCGCGGGTTCTGTTCTGAAGGTACTAAGAAACTTCTGGTTTATGACTACATGCCAAATGGTTCCTTGGATTCCAAAATGTTTCAGGAAGATAGTTCCAAAGCGTTGGATTGGAAAGTGAGGTACCAAATTGCTCTTGGAACAGCAAGGGGGTTGACTTATCTTCATGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTTCTTGATGCTGATTTGGTTCCAAAGGTGGCGGACTTTGGCCTTGCAAAGCTGGTTGGGAGAGACTTCAGCAGGGTCCTCACTACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATATCAGGTGTGGCTATCACTGCCAAAGCTGATGTATACAGCTATGGAATGATGCTTTTTGAGTTTGTTTCAGGTAGGAGGAACTCTGAGCCATCGGAAGATGGCCAAGTGAGGTTCTTCCCTACCTTTGCTGCAAATATGGTCCACCAAGGAGGGAATGTGCTTAGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTCATTAGAGTCATCAAAATCGCTTCATGGTGTGTCCAAGATGATGAATCTCACAGGCCTTCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGTTCTTGGAACTGAGTTTGCCTCCAATTCCAAGGACCCTCCAAGCCTTTGTTGACAACCATGAGAGCATAGTTTTCTTCACTGACTCCAGCTCCACACAGAGTTCACAGGTAAAGAGTAATGTCTCAACTGCCTCCTCACAAGCCAAGAGCCACACCGCATCCAATAGCTCCCAGTCCTCATCACAAAATTAA 2853 0.4402 MDNDDGPERMASIFMLMTLNLKLHRPANKTNMARPNSNHAIIIVQFLRLRKTRRPFERKTKAALQPYINFQAKRRDRVINWTHSTFLPFTHNPTKHIISTFVNFSHFPCGTNQTISNMRNKKPSLLWLSLFITCFLSFHSYTSLAVLTTISANQSLSVDQTLVSQEGHFELGFFSPGNNSKYYIGMWYRKISQRTYVWVANRDNPVSDKNSAKLTILDGNLVVLDQSQSIVWSTNLSSPSSGSVVAVLLDSGNLILSNRPNASATDAMWQSFDHPTDTWLPGGKIRLDNITKKPQYLTSWKNLEDPATGLFSLELDPAGSTAYLILWNKTELYWSSGVWNGQIFSLVPEMRLNYIYNFTFESNENESYFTYSLYNSSIISRFLMDVSGQIKQLTWLDNAQQWNLFWSQPKQQCDVYAFCGGFGSCTENAMPYCNCLTGYEPKSQSDWNLTDYSGGCVRKTELQCGSPNSSNKDKDRFLPILNMKLPNHSQSIGAGNVGDCEAKCLSNCSCTAYAYGNSGCLIWYGDLLNLQQLTQDDSSGQTLFLKLAASEFHDSKSNKGTFIGAVAGAVGGVVVLLIVFVIVMLRRRKRHVGTGTSVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNGSLDSKMFQEDSSKALDWKVRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADLVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQVRFFPTFAANMVHQGGNVLSLLDPRLEGNADIEEVIRVIKIASWCVQDDESHRPSMGQVVQILEGFLELSLPPIPRTLQAFVDNHESIVFFTDSSSTQSSQVKSNVSTASSQAKSHTASNSSQSSSQN 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01070 950 CDD B_lectin 153 275 IPR001480 -
Spst11g01070 950 CDD STKc_IRAK 621 888 - -
Spst11g01070 950 Pfam S-locus glycoprotein domain 334 443 IPR000858 GO:0048544
Spst11g01070 950 FunFam Serine/threonine-protein kinase 690 893 - -
Spst11g01070 950 Gene3D - 143 272 IPR036426 -
Spst11g01070 950 Gene3D Phosphorylase Kinase; domain 1 580 689 - -
Spst11g01070 950 SUPERFAMILY alpha-D-mannose-specific plant lectins 182 340 IPR036426 -
Spst11g01070 950 Coils Coil 950 950 - -
Spst11g01070 950 Pfam D-mannose binding lectin 195 301 IPR001480 -
Spst11g01070 950 SUPERFAMILY Protein kinase-like (PK-like) 601 919 IPR011009 -
Spst11g01070 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Spst11g01070 950 FunFam Serine/threonine-protein kinase 142 272 - -
Spst11g01070 950 CDD PAN_AP_plant 460 548 - -
Spst11g01070 950 FunFam Serine/threonine-protein kinase 582 689 - -
Spst11g01070 950 ProSiteProfiles Protein kinase domain profile. 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01070 950 SMART ntp_6 472 547 IPR003609 -
Spst11g01070 950 Pfam PAN-like domain 471 529 IPR003609 -
Spst11g01070 950 SMART serkin_6 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01070 950 Pfam Protein kinase domain 618 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g01070 950 Gene3D Transferase(Phosphotransferase) domain 1 690 892 - -
Spst11g01070 950 PANTHER OS07G0415500 PROTEIN 125 897 - -
Spst11g01070 950 ProSiteProfiles Bulb-type lectin domain profile. 147 269 IPR001480 -
Spst11g01070 950 SMART blect_4 153 275 IPR001480 -
Spst11g01070 950 ProSitePatterns Protein kinases ATP-binding region signature. 621 644 IPR017441 GO:0005524
Spst11g01070 950 ProSiteProfiles PAN/Apple domain profile. 464 548 IPR003609 -
Spst11g01070 950 MobiDBLite consensus disorder prediction 919 950 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01070 Spst-Chr11 34918127 34922028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01070 598 895 Receptor kinase-like Gene Family AT5G20050 43.631 8.45e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst11g01070 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01070 - - gmx:100782119 1450.65