Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01058 ATGCTGTACAGAGGTTTTGATGTCGTTGTCTTTATCGCCGTGGAAATAGTAAGCAAAGTCGACTACAGGAGTGCAACTTGCATGCACTACATGTTAGTGAAAAGCAACAATAAAGGGGATGGATCCAAGTCCCTGGCCGATACACTGGCGAGATGGAAAGAATACAATGTTTGGCTTGAATCTAGCAATGAAGCTGAGAAGCCAGTTAGGAAAGTTCCTGCCAAAGGATCAAAGAAGGGGTGTATGAAAGGTAAAGGAGGGCCTGAGAACTCACGCTGTAACTTCCGAGGAGTTAGGCAAAGGACTTGGGGAAAATGGGTTGCTGAAATCCGGGAGCCAAACAGAGGGAGTAGGCTCTGGTTGGGTACTTTTCCCACTGCCATTAGTGCTGCTCTAGCGTATGATGAAGCAGCTAGGGCAATGTATGGTTCTTGTGCACGCCTCAACTTTCTCAACATTGAAGTTTCAACTTTATCTGAGGAATCATCAAGAAATTCTCCAGCTGCTAGTCAATCTGGTTCTGCATTGATGATATCAGAGAGTCCTGAATGTATGATTTTTCCGAACAACTCGGGGGGAGAAACAGCCAAGGATGATGACATGGAAAGCCTATCCTTATCCTTAAGTGTGAAACATGAGCATCTTCCATTGTCTTGA 657 0.4505 MLYRGFDVVVFIAVEIVSKVDYRSATCMHYMLVKSNNKGDGSKSLADTLARWKEYNVWLESSNEAEKPVRKVPAKGSKKGCMKGKGGPENSRCNFRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAARAMYGSCARLNFLNIEVSTLSEESSRNSPAASQSGSALMISESPECMIFPNNSGGETAKDDDMESLSLSLSVKHEHLPLS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01058 218 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 34 175 - -
Spst11g01058 218 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Spst11g01058 218 CDD AP2 93 150 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Spst11g01058 218 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
Spst11g01058 218 MobiDBLite consensus disorder prediction 68 88 - -
Spst11g01058 218 SUPERFAMILY DNA-binding domain 94 150 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01058 Spst-Chr11 34775294 34776833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01058 23 183 AP2-EREBP Transcription Factor Family AT2G40340 48.193 4.85e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst11g01058 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01058 - - gmx:100783729 315.849