Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01055 ATGGAATTGACAAGACCCAGTTATGCTGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAGGAAGAGGAGTTTGCTAGAGATGGTGGAGCGTTGACATCATCCATTTATGTTCATAGAATAAAGGTAGAAAATGAGTGGAAACAGTGCAGGAAACAATTGATAGTGAGGAACAATGACTTGCATCCCCTGGAAGGGAGCAGTGACATAAAGACTGTAAAAAGTAATATACACACAGAAACTAAGCATCTGCCACTTCATATGAAAAGGAAAAATTCGGATTGCATAAAGTTTAGTACTAGTCCTGTTTTAGAAAAGGGTAGCTCTCGATATTTGTTGATAGAGAATTCTGGATCAACCTTTGGTGTGGAAAGTGGTCATGGAAGAAATTTGCTTGCTGAATCACCAAAGAATCAAATGGCACCAAGTCCTTCTCCATCACCAGCCAGTTCTCCATTATCACCAAGTCATAGTCCAACACCAGCCCCTTCACCATCATCACCACCAACTCCAATTCCCAAAAGTAAGGATTTACCACTCCCTCCAGATATGTTTTTGCCATTTCCACCTCCACTCCCTGTAGCTCGTTCTCCTCCTAAAAATTTCCGACCTTTAGTACCTGTTCCTCCACCACCTAGCAATGATGACAAACAGAAGCAAAAAGTTATTTTAGCTGCCACTTTATCAGGAGTTGTAATCTTGATAGGCTTGGCCCTCTGTTATTGTGCGACCAGAAGCAAAAAAAGTGATAGCGATGACAGCCCTTTGCTCGTATTAACCTCAGATGATTATGTTGGCGGTTCAAAGAAGGTTGTTCGATTGGGAGATTCTGACGTCGAAGAACATGACATTGGCAATGGAAAGAACCCTTCTAATTTTAGAAATTTCTCCTCTAGGAAGGGTGGAGATATCAATGTTTCAATTGTGGAGACAGGATCATCATCAGAAGGTGTAGAAAAAGCACCAGAGCCTTCTAGTGTAAAACCTGCACCTGCATCTGCACCTGCACCTGCACCTGCACCTGCATCTGCCCCTGCACCTCCACCTGCACCTCCACCTTCACCTGCACCTACACCTCCTCGTGGACCACCACCACCACCTGCGCCTCGTGCACCGCCGCCTCCTGGTCCTCGTGCACCACCGCCTCCAAGAGGTGCTCAACCTCCACCAGCTCCTCCCAAACATACGGGAGGTAATAATCAAGGACCACTTGCTAAAGAAGGAAGTTCAGGTGAGGGTGACGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCTGGCCAAACCATGGTGTGGCATGAGATCAGTTCAGGATCATTCGTGTTCAACGAGGAAATGATGGAGTCTCTATTTGGCTTCACCAACCAGAACAATAACGAACGCAAAAAAGATTCACCGGCTATAGATACAGTGCAATATATTAAGATTATTGACCCAAAGAAAGCACAAAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTGTCGATGCTCTTGTAGAAGGTAATGATATTCCCATGGAGCTTACCCAGACGTTGTTGAAGATGGCACCTACACAAGATGAGGAAATGAAGCTTAAGAGATTCACAGGACAACTGCATGAACTAGGCCCGGCAGAGAGATTTCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATGTCTCATGTTCATGTATAACCTTAGAGAAGAATTTTCAAGCATCAAGGATTCCTTTTCCACATTAGAGGTGTCTTGCAACGATCTGAGACAAAGCAGGCTATTCCTGAAACTCCTAGAGGCAGTTCTCAAAACCGGCAACCGCATGAACGACGGAACCTACCGCGGCGGCGCACAGGCATTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTCAAGGGAACAGACGGCAAGACCACACTCCTGCATTTCGTCGTCGAGGAGATCATCCGCTCCGAGGGAATCCGCGCCGCGCGCGCCGAAAGAGCGAGGCGAAGCAACACCAGCGTCGGCACCAACGACGACTCTGAAGAGGGCGGCGAGTATTCCGAGGAATACTACAGCAGCATCGGCCTCCAGGTTGTGTCGGGTCTCGGCGCGGAACTCGTGGCCGTGAAGAAGGCGGCGCTGATAGACGGTGACGCGCTCTCCTCGGCGGTGTCGAAGCTGGGGTACTCGTTGGGGAAGACACAGGCGTTTCTGAACACGGACATGAGGAACCTGGACGAAGAGAGCGAGTTCCTGCTTTGCATGGAGCGGTTCATGGAGAGTGCGAGGGAGGAGGTGATGTGGTTGGTTGAGGAGGAGAAGAGGATAATGGCGCTGGTTAAGAGCACTGCCGATTACTTTCACGGAAACTCCGGCAAGGACGAAGGGTTGCGTTTGTTCTTGATCGTGCGTGATTTCTTGCTCATCTTGGACAAGGTTTGCAGAGAGGTGAAGGACACAACCATGAAGCTGGCCAAGGCTTCCCGCAATAACAAGAAGGAGCCTAGGACTTCGGCTTCTTCCCCTGACGCGCGTGGTCAACAATCGCCAACTCTATCCTCTGATTTGCATAGAAGGCTCTTCCCTGCCATTGCTGAGAGAAGAGTGGATTACTCTACCTCTGATAGCTCTGATGACGAGGACTTCTAA 2676 0.4824 MELTRPSYAVVYVILLCALAQGGSEGKEEEFARDGGALTSSIYVHRIKVENEWKQCRKQLIVRNNDLHPLEGSSDIKTVKSNIHTETKHLPLHMKRKNSDCIKFSTSPVLEKGSSRYLLIENSGSTFGVESGHGRNLLAESPKNQMAPSPSPSPASSPLSPSHSPTPAPSPSSPPTPIPKSKDLPLPPDMFLPFPPPLPVARSPPKNFRPLVPVPPPPSNDDKQKQKVILAATLSGVVILIGLALCYCATRSKKSDSDDSPLLVLTSDDYVGGSKKVVRLGDSDVEEHDIGNGKNPSNFRNFSSRKGGDINVSIVETGSSSEGVEKAPEPSSVKPAPASAPAPAPAPASAPAPPPAPPPSPAPTPPRGPPPPPAPRAPPPPGPRAPPPPRGAQPPPAPPKHTGGNNQGPLAKEGSSGEGDAPKPKLKPFFWDKVNAKPGQTMVWHEISSGSFVFNEEMMESLFGFTNQNNNERKKDSPAIDTVQYIKIIDPKKAQNLSILLRALNVTTEEVVDALVEGNDIPMELTQTLLKMAPTQDEEMKLKRFTGQLHELGPAERFLKVLVDIPFAFKRLECLMFMYNLREEFSSIKDSFSTLEVSCNDLRQSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVEEIIRSEGIRAARAERARRSNTSVGTNDDSEEGGEYSEEYYSSIGLQVVSGLGAELVAVKKAALIDGDALSSAVSKLGYSLGKTQAFLNTDMRNLDEESEFLLCMERFMESAREEVMWLVEEEKRIMALVKSTADYFHGNSGKDEGLRLFLIVRDFLLILDKVCREVKDTTMKLAKASRNNKKEPRTSASSPDARGQQSPTLSSDLHRRLFPAIAERRVDYSTSDSSDDEDF 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01055 891 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 840 - -
Spst11g01055 891 Pfam Formin Homology 2 Domain 420 819 IPR015425 -
Spst11g01055 891 PANTHER FORMIN-RELATED 216 877 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst11g01055 891 MobiDBLite consensus disorder prediction 286 426 - -
Spst11g01055 891 MobiDBLite consensus disorder prediction 834 848 - -
Spst11g01055 891 SMART it6_source 416 834 IPR015425 -
Spst11g01055 891 MobiDBLite consensus disorder prediction 294 326 - -
Spst11g01055 891 Gene3D Formin, FH2 domain 422 858 IPR042201 -
Spst11g01055 891 MobiDBLite consensus disorder prediction 128 223 - -
Spst11g01055 891 ProSiteProfiles Formin homology-2 (FH2) domain profile. 416 845 IPR015425 -
Spst11g01055 891 MobiDBLite consensus disorder prediction 834 867 - -
Spst11g01055 891 MobiDBLite consensus disorder prediction 334 402 - -
Spst11g01055 891 MobiDBLite consensus disorder prediction 147 220 - -
Spst11g01055 891 MobiDBLite consensus disorder prediction 849 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01055 Spst-Chr11 34734926 34739194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01055 382 879 FH2 protein (formin) Gene Family AT5G54650 57.485 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01055 - - vum:124821202 717.613