Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01023 ATGGAATCATGGAGTGTGGACTTTTTTCGTAGGTTTGATTTTTGGATTTTTCCAGCTGGTGATGATAGCTTCAAGGGAGTTGACCTGGTTCTTCTTCAGTTAGAGGATGCTTCTGTGATTGGGTTCACTGAGAAGAGTGTGCTGAAGATTAAGGCCGTGGTGGGGTCAATGGGTTGGAAGAGATCTACTTTGGAGTGCCAGAGACTAAAGATCTGTGAACAAGTTCTGTTGGGATTTTTGTTGATCTGCACAATTCACACTTCAAATGCAGTCACTGATCCAACTGATGGTAAGGATTCTTACTCTTTTGGCATCTTGAGCTTTGGCATTTTGCGTGGTCTCCCTATTGCTGCGATTAATAGCTTTTATATTGCTCTGGGATCCCCTGCTCTTCCTGGATGGGTTGCTAGTGGAGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCTGTTGGTCATTCTTTTTGTAATTTCTTCTGCATCATCTTTACTGTTTGCCATGTATTTTGGAGGTAGTGATCTAAGCAACAACAACATTGGAGGAAATATTCCATCCAGTTTGCCAGTTACCATGAAAAACTTTTTTCTTTCAGACAACCAGTTTACAGGAAGTATTCCAACCTCTTTATCCACTTTGACTGGGCTGACTGACATGTCTCTCAACAACAATTTTTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCTATTGATCAATCTTGATCTATCTCATAATAATTTGAGTGGGGAATTGCCTTCTTCTATGGATAACTTGTCATCTATCACCACCTTACGCTTAGAGAACAATCAACTCTCTGGGACACTTGATGTTTTGCAAGACCTTCCTCTTAAAGATTTGAATGTTGAGAACAACCAGTTTTCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCAGCCTTCAGGCAAGCTGGAAACCCATTTAATGTTAATGGTACAAGTCCCACATCTTCACCTCGCTCCCCAGCAATAGCACCACCAGGGACTCCGATTTCTGGGGCACCACCAGGAACTCCTGTATCTGGGACACCACCATCTACTGGCACACCTACTAAACAGGCTGATGGACCAACTGCAGCAAATGATTCCCACGCAGGGAAATCCAAAAAATCCACAAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGCATTCATTCTCTTTATTCCAAGATGTAGCAGAAGGGAACGTGATGACAGAAGGTTCAAGCGAGGTCAAATTGGTACATATGGGGCTGAAAGACAGAATTCCAGGGATAACGGGGCTTCACTCCAACCACCTAGTCAAATGGAAAAAGCAGTACCAGTAGGGGATGTTCCAAGGCCAAAAGAGGGTCGTCAGGCAGAGTCCAGGACTGTCTGGGCTAATCCAACTCCACTGAGTGAGCAACAGAAGGATGTGCAAAGAATGGCAACGATACCAAAGCCAGGAGATCATGAGATAGATATTAGTACACTAGAAGTATATTCAATGCCTCCTCCCCCTCCACCACCACCTCCACCCCCGCCTCCACCTCCACCTCCTCCTCCTCCTCCTCCTACTACTACTACTGAGAAGGTAACTGTTGAACCAGCCACATCCGGCAGAGCAACTAATGTCACTCCACCCATAAGAAGCTCTGTTCCTCCTCCTACTTTTGCAAAATATTTTGCTATTGCATCCCTTCAACAGTATACAAACAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTGGGTAATGTGTATAGAGCAGAGCTTCCTAATGGCAAGAAACTGGACAAGAGAGCCTCTGATCACCAGAAGGATGATGAATTTTTTGAATTGATAAATAGTATTGACAGAATACGCCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTTATATATGAGTACTGCAGCAATGGATCACTGTATGATGCACTCCACTCAGATGATGACTTCAAAAGAAGACTCTCATGGAATGCTCGAATTCGAATAGCACTTGGGGCAGCTAGAGCCTTAGAATATCTGCATGAGCTATGTCAGCCACCTGTAGTACATAGAAATTTGAAGTCTGCCAATATTCTGCTTGATGATGATTTATCCGTGCGGGTCTCAGACTGTGGTTTAGCTCCATTGATAGCTTCTGGATCAGTCAGTCAGCTCTCGGGGAACCTGCTAACTGCTTACGGCTATGGAGCTCCTGAATTTGAGTCTGGAATATACACATACCAAAGTGATGTATACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCAGTCCCACGACAGGACACGTCCTCGGGGGGAGCAATTTCTGGTCAGATGGGCAGTTCCCCAACTTCATGACATTGATGCGTTATCAAGCATGGTCGATCCTTCTTTAAATGGAAATTACCCAGCAAAATCACTGTCAAATTTTGCAGACGTTATCTCTAGATGCCTTCAGTCCGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTTGTCCTGTACTTACTAAATATGATAAGGAGGGAGTCTCGGCAAAATGAATCAAATGAAAAATGA 2592 0.4394 MESWSVDFFRRFDFWIFPAGDDSFKGVDLVLLQLEDASVIGFTEKSVLKIKAVVGSMGWKRSTLECQRLKICEQVLLGFLLICTIHTSNAVTDPTDGKDSYSFGILSFGILRGLPIAAINSFYIALGSPALPGWVASGGDPCGEGWQGILLVILFVISSASSLLFAMYFGGSDLSNNNIGGNIPSSLPVTMKNFFLSDNQFTGSIPTSLSTLTGLTDMSLNNNFLTGEIPDAFQSLTLLINLDLSHNNLSGELPSSMDNLSSITTLRLENNQLSGTLDVLQDLPLKDLNVENNQFSGPIPPKLLSIPAFRQAGNPFNVNGTSPTSSPRSPAIAPPGTPISGAPPGTPVSGTPPSTGTPTKQADGPTAANDSHAGKSKKSTKRVVWISIASVLGFIILLLAFILFIPRCSRRERDDRRFKRGQIGTYGAERQNSRDNGASLQPPSQMEKAVPVGDVPRPKEGRQAESRTVWANPTPLSEQQKDVQRMATIPKPGDHEIDISTLEVYSMPPPPPPPPPPPPPPPPPPPPPPTTTTEKVTVEPATSGRATNVTPPIRSSVPPPTFAKYFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKKLDKRASDHQKDDEFFELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKRRLSWNARIRIALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRTRPRGEQFLVRWAVPQLHDIDALSSMVDPSLNGNYPAKSLSNFADVISRCLQSEPEFRPAMSEVVLYLLNMIRRESRQNESNEK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01023 863 SUPERFAMILY Protein kinase-like (PK-like) 555 847 IPR011009 -
Spst11g01023 863 Gene3D Ribonuclease Inhibitor 160 328 IPR032675 -
Spst11g01023 863 MobiDBLite consensus disorder prediction 352 366 - -
Spst11g01023 863 Gene3D Phosphorylase Kinase; domain 1 553 650 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 534 552 - -
Spst11g01023 863 Pfam Leucine rich repeat 214 273 IPR001611 GO:0005515
Spst11g01023 863 MobiDBLite consensus disorder prediction 505 533 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 315 379 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 426 443 - -
Spst11g01023 863 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 651 861 - -
Spst11g01023 863 SUPERFAMILY L domain-like 173 309 - -
Spst11g01023 863 Gene3D Transferase(Phosphotransferase) domain 1 651 863 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 419 484 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 503 556 - -
Spst11g01023 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 126 855 IPR046959 -
Spst11g01023 863 MobiDBLite consensus disorder prediction 328 351 - -
Spst11g01023 863 SUPERFAMILY Formin homology 2 domain (FH2 domain) 519 529 - -
Spst11g01023 863 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 114 328 - -
Spst11g01023 863 Pfam Protein tyrosine and serine/threonine kinase 581 845 IPR001245 GO:0004672|GO:0006468
Spst11g01023 863 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 544 650 - -
Spst11g01023 863 MobiDBLite consensus disorder prediction 467 484 - -
Spst11g01023 863 ProSiteProfiles Protein kinase domain profile. 578 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01023 Spst-Chr11 34416087 34422437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01023 116 854 Strubbelig Receptor Gene Family AT4G03390 59.245 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst11g01023 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01023 - - ahf:112737625 1026.16