Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01011 ATGAAAATTGGACATGGTTTATCGTGTTCTGCTTTTGTGTTCTTGAGTGAAAAAGGGAACAACTTGACCTTATATTCATCAGATGTCAGCATTCTGGAGTTGAGCAAATGGGTTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAAGAGCAATGGAGACACGAATTTTCACTAATGGAAAGAGCCGGGGTTCCTGCATCTTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTTTTCGATGGTCATGGTCCGCATGGTCATCTTGTTGCACGCAAAGTTAGGGATGCCTTACCGATTAAACTGCTATCATTTTTGCATTCTTCTGAATCAAAGCGAAATGGTTCAGGTAAAACTTGGTTCAAAGGGAATGTAAAACCTGATAGTGTAGAATTTGAGAAGGATTGCTCCACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAACTCAGGTCTCATCCAAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGGGATTCTCGGGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGCTGCAAAGGCAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGAGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCATTTGGAGACTTCTGCTTGAAGGAGTATGGTGTGATTTCTATCCCTGAATTTTCTCATCGGCAGCTTACAGACAGAGATCAATTCATTGTTCTTGCCTCAGACGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCTTCAGCACCAACACGATCATCGGCAGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTTAAATACCCTACTTCAAAGATGGACGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATCCATAGCAATCATTCGGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAGAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTAATGGAGTACTAAATGTTGATGTTGAAGATGGAACATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCCGAGGAAAGGCCAGACTCTTGA 1410 0.4362 MKIGHGLSCSAFVFLSEKGNNLTLYSSDVSILELSKWVVVSQQAVGVLVAARAMETRIFTNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPIKLLSFLHSSESKRNGSGKTWFKGNVKPDSVEFEKDCSTEDKMNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIHSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGVLNVDVEDGTSADDQNWSGLEGVTRVNSLVQLPRFSEERPDS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01011 469 CDD PP2Cc 65 370 IPR001932 -
Spst11g01011 469 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Spst11g01011 469 Pfam Protein phosphatase 2C 136 347 IPR001932 -
Spst11g01011 469 SUPERFAMILY PP2C-like 63 372 IPR036457 -
Spst11g01011 469 MobiDBLite consensus disorder prediction 380 446 - -
Spst11g01011 469 Gene3D - 52 372 IPR036457 -
Spst11g01011 469 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Spst11g01011 469 MobiDBLite consensus disorder prediction 381 446 - -
Spst11g01011 469 SMART PP2C_4 54 368 IPR001932 -
Spst11g01011 469 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01011 Spst-Chr11 34275592 34280212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01011 53 469 PP2C-type Phosphatase Gene Family AT1G03590 73.944 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01011 - - gmx:100813306 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01011 11 34275592 34280212 Spst11g01011 11 34275592 34280212 ECH
Spst5g00849 5 7835733 7838020 Spst11g01011 11 34275592 34280212 PCT