Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01008 ATGAAGCTTGTGGCTGTCGTCCTAAGCGTGAATGTGAAGCTGATTAACGATGATGCCACCAACTTGGCTCGAGAAGATTCGCTTCCAAGATATACCTTATCCTTTCCTTTATGGTTAGAGTGGAGTAGTGCTTCTGTATGGACAGAAGAGGAATGCCAGTTTCTACTTCGTAGTTACGTGTGTGAATCTGGTGTTTATGCGGAGCTTGTTTTGAATACTTTCCCTGGTCAGCATGGTACTATAAGACTTGAGGAAGGGGAGGAATCTTCTGCTAGTCAGCTACCAAAGACATCCTTGTTTCTGTTCCGTGACAACACTAATATCTCTACCCCACTTCACATTAGGCTAGATCTAAAGGCCCACTTAGTAACAGGCCATGCCCTTATGATATCTGGATTTTGTTTCAACGGACGGAATGGGCTGGGCCTGGCTGCTATGCACCAGGCTTCGGCTGGTCCAGTCCATGATTTCATGCTCACTTTGATACAAGCAGCAGACTTATTAATTAAACTACAAACTATAGGCCCAGAAAGCATAATCACAGTAGGTGTATGCATGTGTGTTCCGACAACACAAGGTCTTAAATTGGAGTTTTGCATTGCTGTTGCTCTTACTGATTTTGATATGATTCATGACCTTAAAGCCCAGTTAGAAGGAATGGGCTGGGCAGGCTGGGATGACAAGCCCGGACGGTCCAATATATCACCTGATTTTAGCCATTCCACACCCACTGAACTGAACTCACTAACTGGAAGCCTAGTTGTAAGAAAGAGAAAGGCTTGCTGCACTGAGCACCAAGTTCATACGTCTGATTTCGTGTATATTCCCCAGAATATGGAGACTGTTCTTTTCAATCACTCCCCACCTTCGGAATTCAAGGGTTTGAGCAAGGAGGAAGAAGACTCATTGCTTGGGCAAGTTGAAATATGGAGGTACATGCTATGCTACACTGACTCTCTGGCCATAAAATGTGTCATTGAGCTTCGCATACCCGATATAATACACCGCTATGGTAAGCCACTGTCCTTGTCTCAAATTGTGGAGAACATTGAAGATGCACCCTCCCCAGATGCCAATCTTCTCCAGAGAGTGATGACACTGATGGTGCGCAGAAAGATCTTCAGTGCAGAACAGTCAGAGACTGGAGAGACCCTTTATGGCTTGACAAGTGCTTCCGAATGGATCCTACGAGACACAAAAATGACGCTAGCACCCTTATTCCTGCTGGAGAATCACCCAGTTCACCTGACCCCCGCTCAACACATGAGTGAGATTATAAGAGAAGGCATAAAAAATGGCACTGCTTTCTTTAGGTCTCATGGGCATGATCAATTTGAGCTGACGGGGGTAGACCCTGAGTACAACAGGATGTTCCATGAGGGGATGATGTGTACTGCTAGGGTTATATCCAAGGCTGTGATCAATGGGTACAAAGAAGGATTCAACCAGATTGAGTCCTTGGTTGATGTGGGAGGGAGCACTGGTGGATCGATTTCTGAGATTGTGAGGGCTTACCCTCACATCAAGGGCATCAACTTTGACTTGCCTCATGTGGTTGCCACTGCACCTAAGTTTGAGGGAGTCACCCATGTTGGAGGTGACATGTTCGTCTCCGTTCCCAGTGCTGATGCCATTTACATGAAGTGGATTCTGCATGACTGGACCGACGAGCAATGCATCGAGCTCTTGAAGAACTGCAGGAAGGCAATACCAGAGAAGACAGGAAAGGTGATAATCGTGGATCATGTGCTTCGACCGGAAGGGAACGAGCTCTTCACCGACGCTGGCTTTGCGTTTGACATGATTCTTCTCGCTCACAACGCTGGTGGCAAAGAGAGGACCGAAGAGAATTGGAAGTTACTATTCAAAGAAGCAGGATTCCCCCGTTACAATATCATCAAGATCCACGCTTTCCCCTCCCTCATTGAGGCGTTTCCAATCTGA 1944 0.465 MKLVAVVLSVNVKLINDDATNLAREDSLPRYTLSFPLWLEWSSASVWTEEECQFLLRSYVCESGVYAELVLNTFPGQHGTIRLEEGEESSASQLPKTSLFLFRDNTNISTPLHIRLDLKAHLVTGHALMISGFCFNGRNGLGLAAMHQASAGPVHDFMLTLIQAADLLIKLQTIGPESIITVGVCMCVPTTQGLKLEFCIAVALTDFDMIHDLKAQLEGMGWAGWDDKPGRSNISPDFSHSTPTELNSLTGSLVVRKRKACCTEHQVHTSDFVYIPQNMETVLFNHSPPSEFKGLSKEEEDSLLGQVEIWRYMLCYTDSLAIKCVIELRIPDIIHRYGKPLSLSQIVENIEDAPSPDANLLQRVMTLMVRRKIFSAEQSETGETLYGLTSASEWILRDTKMTLAPLFLLENHPVHLTPAQHMSEIIREGIKNGTAFFRSHGHDQFELTGVDPEYNRMFHEGMMCTARVISKAVINGYKEGFNQIESLVDVGGSTGGSISEIVRAYPHIKGINFDLPHVVATAPKFEGVTHVGGDMFVSVPSADAIYMKWILHDWTDEQCIELLKNCRKAIPEKTGKVIIVDHVLRPEGNELFTDAGFAFDMILLAHNAGGKERTEENWKLLFKEAGFPRYNIIKIHAFPSLIEAFPI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01008 647 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 401 644 IPR029063 -
Spst11g01008 647 SUPERFAMILY "Winged helix" DNA-binding domain 302 398 IPR036390 -
Spst11g01008 647 Gene3D - 293 395 IPR036388 -
Spst11g01008 647 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 310 646 IPR016461 GO:0008168
Spst11g01008 647 FunFam O-methyltransferase family protein 397 645 - -
Spst11g01008 647 Gene3D Vaccinia Virus protein VP39 397 647 IPR029063 -
Spst11g01008 647 Pfam O-methyltransferase domain 421 627 IPR001077 GO:0008171
Spst11g01008 647 CDD AdoMet_MTases 487 584 - -
Spst11g01008 647 PANTHER O-METHYLTRANSFERASE 309 629 IPR016461 GO:0008168
Spst11g01008 647 Pfam Dimerisation domain 321 369 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01008 Spst-Chr11 34215855 34224548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01008 320 633 Monolignol Biosynthesis Gene Families AT5G54160 37.695 2.28e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01008 K22588 - gmx:100812768 654.825