Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00986 ATGGCGTCTGGATCCTCGGGTCGCGGAAACTCTGCTTCTAAAGGGTTTGATTTCGGTTCCGATGACATCCTCTGCTCCTACGATGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACGCCGATCCGGATTTTCACAAAGCAAGGATGTCAAGGGCATCAATGTTTCCTACTACTGCCTATAATCCACCTGAAGATTCTTTAAACCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGTTTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATACTGTTACAATCTTGACAAATCTATTGGAGAAATGAGATCAGACTTAACTCGTGACCATGTGGAGCAAGATTCAAGACTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAGGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAACTTCAACTTGCTCAGAAAGAATCATCTTCCTCCAGCCATTCGCAGTCCAATGAGGAGAGATCATCACCAACCACAGATCCTAAAAAAACTGACAATGCATCTGAAGCAAACAACCAGCAGTTGGCTCTTGCTCTACCCCATCAAATTGCCCCTCAGCAGCAGCCTGCAGCACCTCCGGCTCAGGCTCAAGCTCCTGCACCAAATGTGACTCAAGCGCAGCAGCAGCCTCCTTATTACATGCCTCCCACCGCCCTGCAGAATTCAGCTGTACCCCAGCTCCCTCAGAATCAGTATTTACCATCTGATCAGCAATATCGAACTCCCCAACTTGTGGCCTCACAACCAACACCATCTCAAGTAACCACATCCCCACCAGTGCAACAATTTTCTCACTATCAGCAGCAACAGCCACAGCAGCAGCAACAATGGTCACAGCAGGTGCAACCACCTCAGCCACCTTCAATGCAATCTCAAACGAGACCCCCCTCTCAAGCTATGTACCCTCCATACCAGCCAAACCAAGCACCGAACCCATCACCTGCAGAAACTCTGCCAAACAGCATGCCCATGCAAGTGCCATATTCTGGAGTTCCACCACCAGGATCAAGCCGCACTGACACCATATCATATGGATATGGAGGAGTTGGCAGAACAGCTCCACAGCAGCCTCCACCCCAGCAGATGAAAGGCTCTTTTCCTGCACCACCAGGAGAAATGTATGGACCTACTGGCTCCCTCCCTGCGCTTCCTCCTCCTAGTAGTGCATACATGATGTATGATGGTGAGGGAGGAAGAGCACATCATCCACCACAACCTCATTTTACTCAACCTGGGTATCCTCCAACAAGTGCTTCCCTTCAGAACCCCCCAGGCCATAATCTTATGGTCCGAAATCCAAACCAGTCGCAGTTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTTGCAAGTGTGATCCAGAGGATGGAAGAGAGTGGACAGGCCATTGATTTCAACTCGGTACTTGACAGGTTGAATGTGCATGGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1584 0.4861 MASGSSGRGNSASKGFDFGSDDILCSYDDYANRDSSSNGNHADPDFHKARMSRASMFPTTAYNPPEDSLNQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLTRDHVEQDSRLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASEANNQQLALALPHQIAPQQQPAAPPAQAQAPAPNVTQAQQQPPYYMPPTALQNSAVPQLPQNQYLPSDQQYRTPQLVASQPTPSQVTTSPPVQQFSHYQQQQPQQQQQWSQQVQPPQPPSMQSQTRPPSQAMYPPYQPNQAPNPSPAETLPNSMPMQVPYSGVPPPGSSRTDTISYGYGGVGRTAPQQPPPQQMKGSFPAPPGEMYGPTGSLPALPPPSSAYMMYDGEGGRAHHPPQPHFTQPGYPPTSASLQNPPGHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHGSVGPQRGWSG 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00986 527 MobiDBLite consensus disorder prediction 271 407 - -
Spst11g00986 527 MobiDBLite consensus disorder prediction 271 327 - -
Spst11g00986 527 Coils Coil 131 167 - -
Spst11g00986 527 MobiDBLite consensus disorder prediction 328 346 - -
Spst11g00986 527 Pfam UBA-like domain (DUF1421) 473 517 IPR010820 -
Spst11g00986 527 MobiDBLite consensus disorder prediction 164 197 - -
Spst11g00986 527 MobiDBLite consensus disorder prediction 217 249 - -
Spst11g00986 527 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 527 - -
Spst11g00986 527 MobiDBLite consensus disorder prediction 213 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00986 Spst-Chr11 34054278 34059204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00986 472 513 Trihelix Transcription Factor Family AT3G01560 40.476 6.38e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00986 - - gmx:100810231 763.066