Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00978 ATGATGAAGCATGTCCACTTCAATTTGGAGGTGGAATTTGTTCATGATATTTTGTTCACCTGTGAATCTGCTGCATATGGAAATACCAGCAACTCAGGTTGTTTGGCTTCGGAAACGCTGTCATTGACACACTCCTCACTCACTCATCGCAACTTGGATTCAGAAGAACTAGGAATGGGACGGATATGGGCCACGGCGGAGGATTTGGGCCGCAACAGTGCCCTTGTGCTGTCGCTTTATCGGCAAATTCTGCGGAGCCTGAATTCGCCGGCGTTGCCGCTTAGCTTCGCAGCGAAGCTGGCGAAGAAGGCGGAGGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGATATGAATGCAAGATTGGGGGATTTTGGACTAGCAACAATGCATCATCATGAGCAAATTGCTCATACCTTGCAAGTGATTGGAACTGTTGGTTTCATGGCACCAGAACTTATTCATACTGGGAGAGCCTCAACTCAGACTGATGTGTTCAGCTTTGGTGTGTTGGTTTTAGAGGTGGTGTGTGGGAGAAGGCCAAATGAAGAAAACAAACCAACCTTGGTTATTTGGTTAACGAGGCTAATGGAGAGAGGAGAAGAATGTTCTGCTATTGATGAAAGATTAAAAGGGAGAAGTGAATGTAACATTGATGAGATTAAGAGGGTTCTTCATCTTGGTTTGTTGTGCACTCATCCCGATCCTCATGTTAGGCCATGTATGAGACAGGTTGTGAAGGTGCTGGAGGGAGACAATTTAGATGCAAACTTGCTTGACAAAATAAATTCAGCAGCTGGCTATGTTGGGAGCTCTGGTAACAGCATTCACCCCACAATTGAGGATACTTTCTCCTCCCACTGCTCTTTCACAACTGTGTGTAACACTGAGGGCAGATGA 927 0.4574 MMKHVHFNLEVEFVHDILFTCESAAYGNTSNSGCLASETLSLTHSSLTHRNLDSEELGMGRIWATAEDLGRNSALVLSLYRQILRSLNSPALPLSFAAKLAKKAEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLATMHHHEQIAHTLQVIGTVGFMAPELIHTGRASTQTDVFSFGVLVLEVVCGRRPNEENKPTLVIWLTRLMERGEECSAIDERLKGRSECNIDEIKRVLHLGLLCTHPDPHVRPCMRQVVKVLEGDNLDANLLDKINSAAGYVGSSGNSIHPTIEDTFSSHCSFTTVCNTEGR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00978 308 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00978 308 SMART serkin_6 7 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00978 308 FunFam Lectin-domain containing receptor kinase A4.3 81 278 - -
Spst11g00978 308 SUPERFAMILY Protein kinase-like (PK-like) 109 262 IPR011009 -
Spst11g00978 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Spst11g00978 308 Gene3D Transferase(Phosphotransferase) domain 1 76 273 - -
Spst11g00978 308 Pfam Protein kinase domain 110 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00978 308 PANTHER - 99 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00978 Spst-Chr11 34004867 34006796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00978 94 261 Receptor kinase-like Gene Family AT2G37710 49.133 6.02e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst11g00978 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00978 - - gmx:100807059 355.14