Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00968 ATGGCGTCTCTGGGTCTTTTGTTTTTGATGATTCCGATGTTGCTTCTTGTTGGGTCATCAACTAAGTTTCAAGCTGAGGCAAGGCAATATGATGTTGGTGGGAGAGAAGGGTGGGTGGTGAAGCCCTCTGAAGACTACAATCACTGGGCTCAGAGAAACAGATTTCAAGTCAATGACACTCTCCATTTCAAGTACAACAAAGGCATTGATTCAGTTGTGGTGGTGAAGAAGGAGGATTTTGATTCATGCAACATCAACACCCCCATTCAAAAAATGGACGATGGAGATTCAATTTTCCCACTTTCCAATTCGGGTCTCTTTTACTTCGTAAGTGGCAACCTTGACAACTGCAAAAGTGGTCAAAAACTCGTTGTTCTTGTCATGGCTGTGAGACAACCTCTTCCTAAGCCTGTGCCGCCGCCGGCAAGCATCCTGCCACCGCAGACAAGCACCATGCCGCCGCAGACTGTTCCGGCAACCGGATTGACCTCTCCGGTGCTGCCTCCGTCGGACAAATCATCCTCAGGGAGGGTTGGTGTGACTGTGGGTTTGGGAGTTTTGCTTGGTTTTTTGTTGTGTGGGTTTGTTGGGTTGGATTAG 600 0.4817 MASLGLLFLMIPMLLLVGSSTKFQAEARQYDVGGREGWVVKPSEDYNHWAQRNRFQVNDTLHFKYNKGIDSVVVVKKEDFDSCNINTPIQKMDDGDSIFPLSNSGLFYFVSGNLDNCKSGQKLVVLVMAVRQPLPKPVPPPASILPPQTSTMPPQTVPATGLTSPVLPPSDKSSSGRVGVTVGLGVLLGFLLCGFVGLD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00968 199 Pfam Plastocyanin-like domain 38 121 IPR003245 GO:0009055
Spst11g00968 199 PANTHER BLUE COPPER PROTEIN 28 146 IPR039391 GO:0009055
Spst11g00968 199 MobiDBLite consensus disorder prediction 138 174 - -
Spst11g00968 199 MobiDBLite consensus disorder prediction 154 174 - -
Spst11g00968 199 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Spst11g00968 199 MobiDBLite consensus disorder prediction 138 153 - -
Spst11g00968 199 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Spst11g00968 199 FunFam Early nodulin-like protein 1 27 132 - -
Spst11g00968 199 CDD OsENODL1_like 28 128 IPR041846 -
Spst11g00968 199 Gene3D - 26 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00968 Spst-Chr11 33926799 33928026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00968 9 175 Phytocyanin Superfamily AT5G53870 47.619 2.31e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00968 - - vum:124829362 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00968 11 33926799 33928026 Spst11g00968 11 33926799 33928026 ECH