Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00963 ATGGGTTCAGCTTCAGCATCTTATTCCTTTACCATTAGTGTGTTATTCCTCGTTTTTGTGTACTTGTCATGTTTCGTAAACAACCTTAATGCAAAGCATAGTCACAACCATCACAAGCCCCAATATACTCAGAATCCTCCCTTGAACTCAAGACTTCACATGGCCTTTCTTGGCCTCCAAGCATGGAAGCAAGTGATCTACTCAGACCCAAATAACTTCACTGCCAATTGGGTAGGTCCTTCAGTTTGCAACTACACAGGTGTGTACTGTGGCCCCTCACTTGATGATCCTGAAGTGAGAGTTGTGGCTGGCATTGACCTTAACTTTGGAGACATAGCAGGGTTTCTACCCGATGAAATAGGCCTTCTGTCAGACCTTGCACTGCTTCACCTTAGTAACAACCGCTTCTGTGGCATCCTCCCAATGTCCTTAACCAACCTTACTTTACTCTATGAGCTTGATCTAAGCAGCAACCGGTTTGTTGGACCCTTTCCTCTGGTTGTACTGTCCCTTCCTAAACTCAACTACCTTGACCTCCGCTTCAATGAATTTGAAGGTCAATTGCCTCCTCAACTCTTCAACAAAACCTTTGATGCCATTTTCGTCAACAACAACCGCTTCAGCAGTTCTATTCCTCCAAACTTAGGCAAAAGCTCAGCTTCTGTCATGGTCTTTGCCAACAACAAATTTGGAGGGTGTCTCCCAGAAAGCATAGTAAACTTTGCTGACACTTTGGAGGAGCTTGTGCTAATCAACACCAGTTTGTCAGGTTGTTTGCCACAGCAAGTGGGGTTTCTCTACAAACTGAGAGTGTTGGATGTGAGTTTCAACAGCATTGTTGGCCCCATACCTTATAGCCTTGCAGGGTTGAATCACTTGGAGCAACTAAACTTGGCACACAACATGATGAGTGGCACTGTCCCTATGGGGGTTTGTGAGTTGCCAAACTTGGAAAACTTCACTTTCTCTTACAACTTCTTCTGTGAGGAAGAGGGTATTTGTCAGAACTTGACATCAAAGAGAATAGCCTTTGATGACAGAAGGAACTGTTTGCCAGAGAAGCCACTGCAGAGGAGCCAAAAGGAATGCAATGCCCAACTTGAACACCCAGTTGATTGCTCTGAGCTTTGCTGTGTTGTGGGGGGCAATGTCTCTGCTGGTTCAGTGGCTGTTCCACCTGCTGCTATTCCTGCAGCAATGCCTATGTCTGCACCTCTTCTTGCGCCAAGCCACTCTTAA 1239 0.4568 MGSASASYSFTISVLFLVFVYLSCFVNNLNAKHSHNHHKPQYTQNPPLNSRLHMAFLGLQAWKQVIYSDPNNFTANWVGPSVCNYTGVYCGPSLDDPEVRVVAGIDLNFGDIAGFLPDEIGLLSDLALLHLSNNRFCGILPMSLTNLTLLYELDLSSNRFVGPFPLVVLSLPKLNYLDLRFNEFEGQLPPQLFNKTFDAIFVNNNRFSSSIPPNLGKSSASVMVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNSIVGPIPYSLAGLNHLEQLNLAHNMMSGTVPMGVCELPNLENFTFSYNFFCEEEGICQNLTSKRIAFDDRRNCLPEKPLQRSQKECNAQLEHPVDCSELCCVVGGNVSAGSVAVPPAAIPAAMPMSAPLLAPSHS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00963 412 Gene3D Ribonuclease Inhibitor 57 222 IPR032675 -
Spst11g00963 412 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 242 330 - -
Spst11g00963 412 SUPERFAMILY L domain-like 66 338 - -
Spst11g00963 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 383 - -
Spst11g00963 412 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Spst11g00963 412 Gene3D Ribonuclease Inhibitor 223 359 IPR032675 -
Spst11g00963 412 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00963 Spst-Chr11 33881549 33882787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00963 49 378 Leucine-rich Repeat extension Gene Families AT3G24480 55.891 7.17e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00963 - - gmx:100782629 698.738