Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00960 ATGACTGCGGCCACCACGCTCCGCTACTCACCCCATTTGACAATCGCGGTTGACACTTCCGATGATCCTCTCTTACCCTTCCTCTGGTCTATAAAAAAGGCGCTAGAAGCATCTGACAATTACGCCCAGAATCTCAATATCTTACTCAGAGATTGCATCCGGAACTTCAAGAACAATGACCGGTACCAAAACGACATCAGATTTCTCAAGATTTGGTTCCTCTATATGGGAGTTAGTGACGATTTTGACAGTGTTTTCAAAGAAATGCTGGACAGTAATGTATGTACCAAGAATGCTTCACTTTATGTGTGGTCTGCAAGTTTATTTGAGTTGAAGGGAAGATTGTGTGATGCCCTCTCCGTATATCAGCTTGGCATTGGCAGGAATGCGGAGCCCATTGAGTGGTTGAGGAAGGCGCGGACCTTATTTCTAAATAGAATTTATGAGGTACAGAATGCTGCTTCAAACCAGAAGGTTGATGATATAGAATCCATGAAATTGGAAAATAATGGCATTAACCCTTGGGACACTTCGACCATGGATGTCCTCTTAAAGAAGATACATCCTTTAATTATAAAATTTGATGGGTATCGTTCAAGCACTAAACCATACACAGGAAAAGTGGTCTTATCTGCGTTGAAGAATTCATCAAGGAATAAAGTTATTGAGATAGGTGGAATGAAGTATCTTATAAAGGGGTGTGCTGGACAGGGAGGTTTTGCCCGAGTATATAAGGCTAATATGATCAGTGATCCTGACAATGTTGTTGCTCTAAAGATACAAAAACCAGCTTTCCCTTGGGAATTTTACATTTATCGTCAGCTTGATCTGCGCATCTTAGAGAGAGAGAGGTCAAGTTATGGTTTTGCTCACCGAGTTCATCTCTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGTGGTAAACTCGTATGTGGTCTTAAGAAAATCCGTGGAAGAAGTGTTATGCATTTATTACACAATTGAAATGTTAAACATGGTTGAAACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTTACAGAAGATGGGTTCTTGAACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGAATTGATCTGAAACTCTTTCCTGATCACACACTATTTAAGGGTGATTGCAAAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGCACGTCACCTCTTAAATTGCTCTACAAATGCAATGGAACTGATTATTTACTGCCTTTTGAGTTTCCCTTCTCTATCACCTGCTAACAGGTAG 1380 0.413 MTAATTLRYSPHLTIAVDTSDDPLLPFLWSIKKALEASDNYAQNLNILLRDCIRNFKNNDRYQNDIRFLKIWFLYMGVSDDFDSVFKEMLDSNVCTKNASLYVWSASLFELKGRLCDALSVYQLGIGRNAEPIEWLRKARTLFLNRIYEVQNAASNQKVDDIESMKLENNGINPWDTSTMDVLLKKIHPLIIKFDGYRSSTKPYTGKVVLSALKNSSRNKVIEIGGMKYLIKGCAGQGGFARVYKANMISDPDNVVALKIQKPAFPWEFYIYRQLDLRILERERSSYGFAHRVHLYSDCSILICDYLANGTLQDVVNSYVVLRKSVEEVLCIYYTIEMLNMVETLHGVGLIHGDFKPDNLLIRYARGDLTEDGFLNRSGPWCDQGLCLVDWGRGIDLKLFPDHTLFKGDCKTSGFRCIEMLEDKPWKFQARHLLNCSTNAMELIIYCLLSFPSLSPANR 459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00960 459 Pfam Protein kinase domain 236 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00960 459 Gene3D - 11 164 - -
Spst11g00960 459 Pfam Mad3/BUB1 homology region 1 14 126 IPR013212 -
Spst11g00960 459 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 154 431 IPR015661 GO:0007094
Spst11g00960 459 SMART mad3_bub1_i 4 126 IPR013212 -
Spst11g00960 459 SUPERFAMILY Protein kinase-like (PK-like) 228 452 IPR011009 -
Spst11g00960 459 ProSiteProfiles BUB1 N-terminal domain profile. 11 169 IPR013212 -
Spst11g00960 459 Gene3D Transferase(Phosphotransferase) domain 1 227 451 - -
Spst11g00960 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Spst11g00960 459 SMART serkin_6 229 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00960 459 ProSiteProfiles Protein kinase domain profile. 229 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00960 223 362 MAP Kinase Kinase Kinase Kinase AT3G15220 28.082 2.36e-06 48.1
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Spst11g00960 Pkinase 1.6e-08 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00960 K02178 - gmx:100802272 749.584