Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00956 ATGACGGGCAGAGATATCCTCCATTTGATGAAGGTGAAAGCAGGGTTTGGAACATCAACACCCGAGACAGGGAAAGGAAAAGGCAAAATATCAAAACACATTACACATGGATTTCACTTGATGAAGGGAAAATCTGGGCATCCCATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAGAGAATTAGGCTTGTTTGCAATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTCCACAACATCTTGAAACAGCATGACTTTTGGACTGAGACAGAAAGCGCAGTGAAGAGGGCTTATCATGAAACGGATGAGAAAATATTGGAAGAAGCACTTGTGTTGGGAAGAGGAGGGTCAACAGCTGTAACTGGAATACTGATCGATGGTCAGAAGCTTGTAGTAGCAAATGTTGGTGACTCAAGAGCTGTTATTTGTGAGAATGGAAAGGCTAGGCAACTATCTGTAGATCATGAACCAAGCAAGGAAAAGAAATCTATTGAGAGGCGTGGGGGGTTTGTATCAAACATTCCAGGTGATGTCCCTCGAGTAGATGGACAGTTGGCAGTAGCAAGGGCTTTTGGTGATAGGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTTGTAGAGGAAGTAGATCATCATACAGAGTTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTGGATTCTATAAGGCAAATAAAGGATGCACAAGCTGCAGCAAAGCACTTGATAGAAGAGGCAGTTTCCAAGAAAAGTAAAGATGACATATCTTGCATAGTTGTGAGGTTCCAATGA 852 0.4167 MTGRDILHLMKVKAGFGTSTPETGKGKGKISKHITHGFHLMKGKSGHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFHNILKQHDFWTETESAVKRAYHETDEKILEEALVLGRGGSTAVTGILIDGQKLVVANVGDSRAVICENGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVFVEEVDHHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAVSKKSKDDISCIVVRFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00956 283 SMART PP2C_4 24 280 IPR001932 -
Spst11g00956 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Spst11g00956 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Spst11g00956 283 Gene3D - 17 283 IPR036457 -
Spst11g00956 283 SMART PP2C_SIG_2 49 282 IPR001932 -
Spst11g00956 283 PANTHER PROTEIN PHOSPHATASE 31 282 IPR015655 GO:0004722|GO:0006470
Spst11g00956 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Spst11g00956 283 CDD PP2Cc 36 282 IPR001932 -
Spst11g00956 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00956 Spst-Chr11 33840116 33842363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00956 24 282 PP2C-type Phosphatase Gene Family AT4G28400 75.676 1.01e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00956 K17506 - gmx:100819846 520.776