Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00941 ATGTTTCTATTATTCCTTCTCTTCCTCTTCTTTCTCTCTCCTCCGCCAGTCTCTCACTCTCTAACCCAAGATGGCCTTTTCCTCCTCGAGGCGCGCCGCTGTCTCTCCGACCCCGACAACTCCCTATCATCCTGGAACCCCTCCGCCGCCACCCCCTGCCGATGGCGCGGAGTCACGTGTCACCCTCTTTCTGGCGCCGTCACCGCCGTCGATCTCTCCTCCTCCTCCCTCTCCGGCCCCTTCCCCGTTACCCTCTGCCGCCTCCCCTTCCTCTCCAACCTCAACCTCTCGTCCAACCTCATCAACTCCACCCTCGCCCCTGTCTCCCTCTGCCGCACCCTCCTCCACCTCGACCTATCCCAAAACATCCTCGTGGGCCCCATCAACTCCGTCGTCGCACTCACTTCCGTCCGTCACCTCGACCTCTCCGGCAACAACCTCTCTGGCGAAATTCCAGCGAAAATCGACGCCCTTCGCCACCTTGAAACGCTCAACCTCGTTAACAATCTTCTCACCGGCACCATCCCCGCTTCACTCGGTAACCTCACTTCGCTCAAACACCTTCAACTCGCTTATAACCCGTTCAAGCCGAGTCCCATCCCGAGACAACTCGGTAACCTCCGTAACCTCGAAACGCTTTTTCTCGCTCTGTGCAACCTTGAAGGCCCCATTCCAGTCACCTTCAGCAACCTCGTCAATTTGACCAGCCTGGACTTGTCTCAGAACAGCATCACCGGTCACATTCCGCGATGGTTCACGCGCTTCACGAGCGTGATCCAAATTGAGCTGTACAATAACTCGCTCTCCGGGGAGCTGCCCAGAGGAATGTCGAAGATGACGAGTTTGAAATCATTCGACGCATCGAGGAACAAGTTGACTGGGACGATTCCGACTGAGTTGTGCGAGTTGCCTCTGGAGTCATTGTACTTGTACGAGAATAAACTCGAAGGGTTTTTGCCGGCGGCCATTGCTCGTTCTCCGAACCTCTATGGACTGAAACTTTTCAGTAACAAACTCGTTGGAACGTTGCCGAGTGATTTGGGAAGCAACTCACCGTTGAACCATATCGACGTTTCGTTTAACCAGTTTACCGGCGATATTCCGGCGAACATTTGCCGGCGGGGTGAGCTTGAGCAGCTACTCTTAATATACAATTCATTTTCGGGTGAAATTCCCAATAATCTCGGGAAATGCAAGAGTTTAATGAGGGTTCGGTTAAGGAACAATAATCTCTCCGGAAGTGTTCCTGACGGGGTCTGGAGCTTGCCCCGTTTGCACTTGCTTGAGCTTTTGGAAAATTCTCTTTCTGGCCACATTTCTAAGGCGATTTCTGGCTCTTCCAGCATGTCAAATTTGTTGCTTTCAAATAACCGATTTTCTGGGTCGATTCCCGAGGAAATCGGATTATTGGACAATCTGGTGGAGTTTGCTGCTAGTAATAATAATTTATCGGGTCGGATTCCGGGGAGTATGGTGAAGTTGAAGCAGTTGGTTAATCTTGATCTTAGTTCTAATCAACTTTCTGGTGATCTTAATTTTGGTGGAATTAGTTACTTGAGTAAGGTCACTGACCTTAATTTGTCACATAATAGGTTTAATGGACGTGTTCCAAGTGAATTAGGAAGTTTGCCTGCGCTTAATTATCTTGATCTTTCTTGGAACAATTTTTCTGGAGAGATTCCATTGCAGTTGCAGAATTTGAGGCTATCTGAGCTGAATTTGTCTTATAACCAGCTTTCTGGGTATATTCCTCCTATTTATACCCATACCAAGTATAAGACGAGTTTTATAGGGAATCCTGGCCTCTGTAGTAATCTCCCTGGGGTTTGTAATGGTCATGATAAGAATAAGAATTGGAGCTATGTATGGATTTTGTGGTCCATTTTTGTGCTTGCTGGACTGTTGTTCATTATTGGGGTGGCATGGCTTTACATTAGGTACAGGAAGGTGAAGAAATTGAAGGAGGAGTTGTACACTTCGAGGTGGAAGTCGTTTCACAAGCTGCGGTTTAATGGGTTTGAGGTTGCTAAGTTGCTGAATGAGGCCAATGTGATAGGAAGGGGATCATCTGGGAAGGTGTACAAGGTGGTGCTCGGCAATGGTGAAGTGGTGGCAGTGAAAAAATTGTATGGAGCACCTACGAAAGTGGATGAAAATGTTGGTTCTAGGAAAGATGAATTTGATGCTGAAGTAGAAACTCTGGGGAGGATTAGGCACAAGAATATTGTGCGGTTGTGGTGTTGTTGCAACGATGGGGACCACAAGTTACTGGTTTTTGAATACATGCCAAATGGGAGCTTGGGTGATTTGTTACAGGGTAGCAACAAGAGCCTGTTGGATTGGCCTATTAGGTATAAAATTGCAGTTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGATTGTGTCCCACCCATTGTCCACAGGGATGTGAAATCTAACAACATATTGGTGGATGAGGAGTTTGTGGCAAAAGTTGCAGATTTCGGAGTTGCCAAAATGGTTACAAGAGCCGGCCAAGGGACAGAATCAATGTCTGTGATTGCAGGATCATATGGCTACATTGCACCAGAATACGCATACACTCTGAGGGTGAATGAGAAGTGTGACATATACAGCTTTGGAGTGGTTATTTTGGAGTTGGTAACTGGGAGACCCCCCATTGGTCCAGAGTATGGTGAAAATGATTTGGTGAAGTGGGTTTCCTCTGCATTGGAACATGAAGGATTGGATCATGTAATTGATCCTACATTGGACTCCAAATACAGGGAAGAAATAAGCAAGGTGTTGAGTGTGGGGTTGCATTGCACCAGCTCCATCCCAGTAACTCGCCCCTCAATGAGAAACGTGGTTAAAATGCTTCATGAGGTAACAACGGTTCCCAAATGCACAAGCTTAAACGCTGGAAATGACCCTTGTTACAATGAAGGCACATCTCATTGTATCAGTGAAGTGTAG 2958 0.4753 MFLLFLLFLFFLSPPPVSHSLTQDGLFLLEARRCLSDPDNSLSSWNPSAATPCRWRGVTCHPLSGAVTAVDLSSSSLSGPFPVTLCRLPFLSNLNLSSNLINSTLAPVSLCRTLLHLDLSQNILVGPINSVVALTSVRHLDLSGNNLSGEIPAKIDALRHLETLNLVNNLLTGTIPASLGNLTSLKHLQLAYNPFKPSPIPRQLGNLRNLETLFLALCNLEGPIPVTFSNLVNLTSLDLSQNSITGHIPRWFTRFTSVIQIELYNNSLSGELPRGMSKMTSLKSFDASRNKLTGTIPTELCELPLESLYLYENKLEGFLPAAIARSPNLYGLKLFSNKLVGTLPSDLGSNSPLNHIDVSFNQFTGDIPANICRRGELEQLLLIYNSFSGEIPNNLGKCKSLMRVRLRNNNLSGSVPDGVWSLPRLHLLELLENSLSGHISKAISGSSSMSNLLLSNNRFSGSIPEEIGLLDNLVEFAASNNNLSGRIPGSMVKLKQLVNLDLSSNQLSGDLNFGGISYLSKVTDLNLSHNRFNGRVPSELGSLPALNYLDLSWNNFSGEIPLQLQNLRLSELNLSYNQLSGYIPPIYTHTKYKTSFIGNPGLCSNLPGVCNGHDKNKNWSYVWILWSIFVLAGLLFIIGVAWLYIRYRKVKKLKEELYTSRWKSFHKLRFNGFEVAKLLNEANVIGRGSSGKVYKVVLGNGEVVAVKKLYGAPTKVDENVGSRKDEFDAEVETLGRIRHKNIVRLWCCCNDGDHKLLVFEYMPNGSLGDLLQGSNKSLLDWPIRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILVDEEFVAKVADFGVAKMVTRAGQGTESMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVILELVTGRPPIGPEYGENDLVKWVSSALEHEGLDHVIDPTLDSKYREEISKVLSVGLHCTSSIPVTRPSMRNVVKMLHEVTTVPKCTSLNAGNDPCYNEGTSHCISEV 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00941 985 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Spst11g00941 985 ProSiteProfiles Protein kinase domain profile. 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00941 985 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Spst11g00941 985 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Spst11g00941 985 SUPERFAMILY RNI-like 262 586 - -
Spst11g00941 985 SMART LRR_typ_2 519 543 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 158 181 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 279 303 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 88 112 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 182 207 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 231 254 IPR003591 -
Spst11g00941 985 SMART LRR_typ_2 134 157 IPR003591 -
Spst11g00941 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 970 - -
Spst11g00941 985 PRINTS Leucine-rich repeat signature 234 247 - -
Spst11g00941 985 PRINTS Leucine-rich repeat signature 494 507 - -
Spst11g00941 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 956 - -
Spst11g00941 985 Gene3D Ribonuclease Inhibitor 199 303 IPR032675 -
Spst11g00941 985 Gene3D Transferase(Phosphotransferase) domain 1 762 968 - -
Spst11g00941 985 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515
Spst11g00941 985 Gene3D Phosphorylase Kinase; domain 1 648 761 - -
Spst11g00941 985 FunFam Leucine-rich receptor-like protein kinase family protein 200 298 - -
Spst11g00941 985 Pfam Leucine Rich repeat 135 150 IPR001611 GO:0005515
Spst11g00941 985 SUPERFAMILY L domain-like 44 303 - -
Spst11g00941 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Spst11g00941 985 FunFam Leucine-rich repeat receptor-like protein kinase 21 177 - -
Spst11g00941 985 Gene3D Ribonuclease Inhibitor 304 612 IPR032675 -
Spst11g00941 985 Gene3D Ribonuclease Inhibitor 26 132 IPR032675 -
Spst11g00941 985 Gene3D Ribonuclease Inhibitor 133 198 IPR032675 -
Spst11g00941 985 SMART serkin_6 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00941 985 SUPERFAMILY Protein kinase-like (PK-like) 679 955 IPR011009 -
Spst11g00941 985 FunFam Receptor-like protein kinase HSL1 304 612 - -
Spst11g00941 985 Pfam Protein kinase domain 681 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00941 Spst-Chr11 33696523 33700030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00941 16 979 Receptor kinase-like Gene Family AT1G28440 56.415 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst11g00941 Pkinase 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00941 - - gmx:100796415 1474.14