Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00926 ATGGAGTGCCAAAGTGAAGAGCGTGCCTCAAAACTACTTGGAGCTCAAACCCATGTTTGGAATCACATTATCAGCTTCGTAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGACATTCCTGACATCATACACAAGTATGGTCAACCCATGCCACTCTCACAACTCACTGCTTCACTACCAATCCACCCTTCCAAAGCCAACTGCATCTTCCGCTTGATGCGAATTTTGACCCATTCTGGCTTCTTCTCTCAACAAAAGCTCAATGAGAATGAGCTTGAAATGGGTTATGTGTTGACTGATGCATCCACTCTACTACTTAAGGACAACCCCTTGAGTATGATACCTTTCTTGCATGCCATGCTTGATCCAATTTTGACAAAGCCATGGCATCACTTGCCTACATGGTTCAAGAATGATGATCCTACGCCATTCCACACAGCACATGAGATGAAAATTTGGGACTTGGCTGGCCGTGATCCAAAACTTAATCTCCTTTTCAATGATGCCATGGCGAGTGACGCTCAACTGGTTGCCAATGTGGTGATTGAGAGGTGTGAGGGAGTGTTCAATGGCTTGGAGTCACTTGTTGACGTTGGGGGAGGCACAGGTACCATGGCAAAGGCAATTGCCAAATCATTCCCTCACTTAGATTGTACGGTATATGATCTCCCACATGTTGTTTCCGGCTTACAAGAAGCTGATAACTTAAAATATGTTGGAGGTGACATGTTTGAGTCCATTCCTCCTGCAGATGCCGTGCTGTTGAAGTGGACATTACATGTCTGGAATGATGAGCAGTGTGTGAGAATACTGAAGAACTGCAAGAAGGGACTAAAGAGGAAGGTGATTGTGATCGACATGGTGGTGGACATTGAAAAGGGAGATGATGAATCAATTGAAACACAGCTCTTTGTTGATATGGTTATGATGGTGTGGCATCCTGGAAAAGAGAGGACTGAGAAAGAATGGGCTAAGCTCATTTTCTCTGCTGGTTTCAGTGACTACAAGATAACTCCAGTGTTGGGATTAAGGTCTCTCATCGAGATTTATCCGTAA 1059 0.4429 MECQSEERASKLLGAQTHVWNHIISFVNSMSLKCAIDLDIPDIIHKYGQPMPLSQLTASLPIHPSKANCIFRLMRILTHSGFFSQQKLNENELEMGYVLTDASTLLLKDNPLSMIPFLHAMLDPILTKPWHHLPTWFKNDDPTPFHTAHEMKIWDLAGRDPKLNLLFNDAMASDAQLVANVVIERCEGVFNGLESLVDVGGGTGTMAKAIAKSFPHLDCTVYDLPHVVSGLQEADNLKYVGGDMFESIPPADAVLLKWTLHVWNDEQCVRILKNCKKGLKRKVIVIDMVVDIEKGDDESIETQLFVDMVMMVWHPGKERTEKEWAKLIFSAGFSDYKITPVLGLRSLIEIYP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00926 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Spst11g00926 352 Gene3D - 2 106 IPR036388 -
Spst11g00926 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 352 IPR016461 GO:0008168
Spst11g00926 352 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Spst11g00926 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 350 IPR029063 -
Spst11g00926 352 PANTHER O-METHYLTRANSFERASE 16 337 IPR016461 GO:0008168
Spst11g00926 352 Gene3D Vaccinia Virus protein VP39 107 352 IPR029063 -
Spst11g00926 352 FunFam O-methyltransferase ZRP4 108 352 - -
Spst11g00926 352 Pfam O-methyltransferase domain 130 334 IPR001077 GO:0008171
Spst11g00926 352 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Spst11g00926 352 CDD AdoMet_MTases 196 290 - -
Spst11g00926 352 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00926 Spst-Chr11 33398682 33399832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00926 30 338 Monolignol Biosynthesis Gene Families AT5G54160 35.759 2.31e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00926 - K16040 gmx:100794122 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00926 11 33398682 33399832 Spst11g00926 11 33398682 33399832 ECH