Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00925 ATGGAATCCCACAGTGAAGACAGTGCTGCAAAATTACTTCGTGCTCAAACCCACACTGGGAATCATGTGTTAAAATTCATATACTCCATGTCCCTGAAGTGTGCAGTTGACTTAAACATACCAGATATCATACACGAGTATGGCAAACCTATGCCACTCTCAAAACTCATTGCTTCACTGAAAATTCACCCTTCCAAGACTTGCTTCATTTACCGCTTGATGAGAATTTTGACTCATTCTGATTTTTTCTATGAGCACGATGTCACCGAAAATGAGCTTGAAGTGAGGTATGTTCTAACTGATGCATCCAAACTACTCCTTAAGGACCATCCCTTTAGTTTGAAATATTTGCCGCAATTCGCACTTCATCCAGTGATTATCAATTCATGGTTTCAATTCTCTACTTGGTTCACAAATGAAGATCCTACACCATTTCATACGGCAAATGGTATGGGATTTTGGGATTTTGCTGCGCATGAGCCTAAATTCAATGACCTCTTCAATGAGGCCATGGCTACTGACAGTCGATTGGTGTCCAGTATGGTGGTTGAGAAGTGTAAGAGTGTGTTTGAGGGATTAGAATTATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGTAGAGGTAATTTCTGAGTCATTTCCACAACTAAAGTGCGTTGTATTTGATCTGCCACATGTTGTTGGTGACTTGCAAGAAACTGAGAACATAAAATATGTTGGAGGGGATATGTTTGAAGCAATTCCTCATGCTGATTCCATTATGTTGAAGTTGATATTGCATGACTGGAACAACGAGAAATGTTTGAAAATACTGAGTAACTGCAAGGAGGCAATAAGTAGCAAGGGCAAGGTTATCATCATTGACATGGTGATGGGGAATAAGAAGGAAGACCGTGAATTAACTGAGACGGAGATTTTCTTTGATATGGTGATGATGATAACCTTCAATGGAAGAGAAAGAAATGAGAAAGAGTGGGCCAGCCTCCTTTTCTCTGCTGGTTTCAGTAACTACACGATCACTCCTACTCAAGGTTTACTTTCTATCATTGAAGTTTATCCATAG 1065 0.4009 MESHSEDSAAKLLRAQTHTGNHVLKFIYSMSLKCAVDLNIPDIIHEYGKPMPLSKLIASLKIHPSKTCFIYRLMRILTHSDFFYEHDVTENELEVRYVLTDASKLLLKDHPFSLKYLPQFALHPVIINSWFQFSTWFTNEDPTPFHTANGMGFWDFAAHEPKFNDLFNEAMATDSRLVSSMVVEKCKSVFEGLELLVDVGGGTGTMVEVISESFPQLKCVVFDLPHVVGDLQETENIKYVGGDMFEAIPHADSIMLKLILHDWNNEKCLKILSNCKEAISSKGKVIIIDMVMGNKKEDRELTETEIFFDMVMMITFNGRERNEKEWASLLFSAGFSNYTITPTQGLLSIIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00925 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Spst11g00925 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
Spst11g00925 354 PANTHER O-METHYLTRANSFERASE 15 337 IPR016461 GO:0008168
Spst11g00925 354 FunFam O-methyltransferase ZRP4 108 354 - -
Spst11g00925 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Spst11g00925 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Spst11g00925 354 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
Spst11g00925 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Spst11g00925 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
Spst11g00925 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Spst11g00925 354 Gene3D - 1 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00925 Spst-Chr11 33318069 33319309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00925 27 352 Monolignol Biosynthesis Gene Families AT5G54160 31.118 1.91e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00925 - K16040 gmx:100793263 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00925 11 33318069 33319309 Spst11g00925 11 33318069 33319309 ECH