Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00924 ATGCAATACTGGAACGACGAGAAATGTTTGAAAATGCTGAGTAACTGCAAGGAGGCAATAAGTAGCAAGGGCAAGGTTATCATCATTGACATGGTGATGGGGAATGAGAAGGAAGACCGTGAATTAACTGAGACGGAGATTTTCTTTGATCTGCAGATGATGATACTCTTCAATAAAAATGAAAGAAATGAGAAAGAATGGGCCAGCCTCGTTTTCTCTGCTGGTTTCAGTAACTACAAGATTACTCCAGTTCTAGGTTTGGATTTTATGATCGAGGTTTATCCATAG 288 0.3958 MQYWNDEKCLKMLSNCKEAISSKGKVIIIDMVMGNEKEDRELTETEIFFDLQMMILFNKNERNEKEWASLVFSAGFSNYKITPVLGLDFMIEVYP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00924 95 Gene3D Vaccinia Virus protein VP39 1 95 IPR029063 -
Spst11g00924 95 Pfam O-methyltransferase domain 4 77 IPR001077 GO:0008171
Spst11g00924 95 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 95 IPR016461 GO:0008168
Spst11g00924 95 PANTHER O-METHYLTRANSFERASE 3 80 IPR016461 GO:0008168
Spst11g00924 95 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 93 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00924 Spst-Chr11 33311070 33311357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00924 1 95 Monolignol Biosynthesis Gene Families AT1G51990 38.144 1.61e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00924 - K16040 vun:114168837 137.887