Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00921 ATGGCTACTGACAGTCGATTGGTTTCCATGGTGATTGAGAAGTGTAAGAGTGTGTTTGAGGGATTAGAATCATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGTTAAGGTCATTGCTGAGTCATTCCCACAACTAAAGTGCATTGTATTTGATCTGCCACATGTTGTTGGTGACTTGCAAGGAACTGAGAACATAAAATATGTTGGAGGGGATATGTTTCAAGCAATTCCACCTGCTGATGCCATTGTGTTGAAGGTAGTTGTGTCGTAA 273 0.4212 MATDSRLVSMVIEKCKSVFEGLESLVDVGGGTGTMVKVIAESFPQLKCIVFDLPHVVGDLQGTENIKYVGGDMFQAIPPADAIVLKVVVS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00921 90 PANTHER O-METHYLTRANSFERASE 1 89 IPR016461 GO:0008168
Spst11g00921 90 Pfam O-methyltransferase domain 8 89 IPR001077 GO:0008171
Spst11g00921 90 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 90 IPR016461 GO:0008168
Spst11g00921 90 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 88 IPR029063 -
Spst11g00921 90 Gene3D Vaccinia Virus protein VP39 1 90 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00921 Spst-Chr11 33147667 33148033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00921 1 88 Monolignol Biosynthesis Gene Families AT5G54160 46.591 2.03e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00921 - K22588 ccaj:109792296 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00921 11 33147667 33148033 Spst11g00921 11 33147667 33148033 ECH