Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00919 ATGGGATTTTGGGATTTTGCTGGGCGTGAGCCTAAATTCAATCACCTTTTCAATGACACCATGGCTATTGACAGTCAATCGGTTTCCAGTATGGTAATTGAGAAGTGTAAGAGAGTGTTTGAGGGATTAGAATCACTGATTGATGTTGGAGGAGGAACAGGGACTATGGTTAAGGTCATTTTTAAGTCATTCCCACAACTAAAGTGCATTGTATTTGATCTGCCACATGTTGTTGGTGATTTGCAAGGAACTGAGAACATAAAATACTTTGGAGGGGATATGTTTGAAGCCATTCCTCCTGCTGATTCTATTATGTTGAAGTGGATATTGCATGACTGGAACGACAAAGAATGTTTGAAAATACTGAGTAATTGCAAGGAGGCGATAAGTAGCAAGGGCAAGGTTATCATCATTGAGATGGTTATGGAAAATAAGAAGGAAGACCGTGAATTAACTGAGACGGAGATTTTCTTTGATATGCAGATGATGATACTCGTCAATGGAAAAGAAAGAAACGAGAAAGAGTGGGCCAGCCTTGTTTTCTCTGCTGGTTTCAGTAACTACAAGATTACTGCTACTCTAGGTTTACTTTCTGTCATTGAAGTTTATCCAGAGTGTTACTCATGGACAAGCTATGTATGA 642 0.3925 MGFWDFAGREPKFNHLFNDTMAIDSQSVSSMVIEKCKRVFEGLESLIDVGGGTGTMVKVIFKSFPQLKCIVFDLPHVVGDLQGTENIKYFGGDMFEAIPPADSIMLKWILHDWNDKECLKILSNCKEAISSKGKVIIIEMVMENKKEDRELTETEIFFDMQMMILVNGKERNEKEWASLVFSAGFSNYKITATLGLLSVIEVYPECYSWTSYV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00919 213 Gene3D Vaccinia Virus protein VP39 1 204 IPR029063 -
Spst11g00919 213 Pfam O-methyltransferase domain 1 186 IPR001077 GO:0008171
Spst11g00919 213 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 203 IPR029063 -
Spst11g00919 213 FunFam O-methyltransferase ZRP4 1 204 - -
Spst11g00919 213 PANTHER O-METHYLTRANSFERASE 3 189 IPR016461 GO:0008168
Spst11g00919 213 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 204 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00919 Spst-Chr11 33091451 33092287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00919 1 202 Monolignol Biosynthesis Gene Families AT5G54160 38.916 2.77e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00919 - K16040 qsa:O6P43_028865 311.997