Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00918 ATGCAAAACATAAGTAATATGAGATTGATACAACACAAACCTACCAAATTATATATGGAATCCCACGGTGAAGAGCATGCTGCAAAACTGCTTCGTGCTCAAATCCACGTTTGGAATCATATTTTCAAATTCATAAACTCCATGTCCCTTAAGTGTGCAGTTGACTTGAACATACCAGATATCATACACGAGTATGGCAAACCTATGCCACTCTCAAAACTCATTGCTTCCCTGAAAATCAACCCTTCCAAGACTTGTTTCATTTACCGCTTGATGAGAATTTTGACTCTTTCTGATTTTTTCTGTGAGCACGATGTCACCGAAAATGAGCTTGAAGTGAGGTATGGTCTAACTGATGTATCTAAACTACTCCTTAAGGACCATCCCTTTAGTTTGAGATGTTTTCCCCAATTCGTACATCCTCCAGTGGTTATCAATTCATGGTTTCAATTCTCTACTTGGTTGACAAATGAAGATCCTACCGCATTTCATACTGCAAATGGTATGGGATTTTGGGATTTTGCTGCGCGTGAGCCTAAATTCAATCACCTCTTCAGTGAGGCCATGGCTAGTGACAGTCGATTGGTTTCCAGTATGGTGATTGAGAAGTGTAAGAGAGTGTTTGAGGGATTAGAATCATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGTTAAGGTCATTGCTGAGTCATTCCCACAACTAAAGTGCATTGTATTTGATCTGCCACATGTTGTTGGTGACTTGCAAGGAACTGAGAACATAAAATATGTTGGAGGGGATATGTTTCAAGCAATTCCACCTGCTGATGCCATTGTGTTGAAGTGGATATTGCATGACTGGAACGACGAAGAATGTGTGAAAATACTGAGTAATTGCAAGAAGGCAATAAGTAGCAAGGGCAAGGTTATCATCATTGAGATGGTGATGGGGAATAAGAAGGAAGACCGTGAATTAACTGAGACGGAGATTTTCTTTGATATGCAGATGATGGTAGTCTTTAATGGAAAAGAGAGAAATGATAAAGAGTGGGCCAGCCTCGTTTCCTCTGCTGGTTTCAGTAACTACAAGATTACTCCAGCTCTAGGTTTGGTTTCTATGATCGAGGTTTATCCATAG 1119 0.4039 MQNISNMRLIQHKPTKLYMESHGEEHAAKLLRAQIHVWNHIFKFINSMSLKCAVDLNIPDIIHEYGKPMPLSKLIASLKINPSKTCFIYRLMRILTLSDFFCEHDVTENELEVRYGLTDVSKLLLKDHPFSLRCFPQFVHPPVVINSWFQFSTWLTNEDPTAFHTANGMGFWDFAAREPKFNHLFSEAMASDSRLVSSMVIEKCKRVFEGLESLVDVGGGTGTMVKVIAESFPQLKCIVFDLPHVVGDLQGTENIKYVGGDMFQAIPPADAIVLKWILHDWNDEECVKILSNCKKAISSKGKVIIIEMVMGNKKEDRELTETEIFFDMQMMVVFNGKERNDKEWASLVSSAGFSNYKITPALGLVSMIEVYP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00918 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 372 IPR016461 GO:0008168
Spst11g00918 372 FunFam Coniferyl alcohol 9-O-methyltransferase 20 124 - -
Spst11g00918 372 Pfam Dimerisation domain 48 96 IPR012967 GO:0046983
Spst11g00918 372 Gene3D - 19 124 IPR036388 -
Spst11g00918 372 PIRSF O-mtase 15 372 IPR016461 GO:0008168
Spst11g00918 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 371 IPR029063 -
Spst11g00918 372 PANTHER O-METHYLTRANSFERASE 31 357 IPR016461 GO:0008168
Spst11g00918 372 SUPERFAMILY "Winged helix" DNA-binding domain 28 129 IPR036390 -
Spst11g00918 372 Pfam O-methyltransferase domain 150 354 IPR001077 GO:0008171
Spst11g00918 372 FunFam O-methyltransferase ZRP4 126 372 - -
Spst11g00918 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00918 Spst-Chr11 33082838 33084247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00918 48 370 Monolignol Biosynthesis Gene Families AT5G54160 34.954 6.50e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00918 - K16040 gmx:100807238 506.523