Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00915 ATGAGAGAAAGTTCCAAGGGAAAGTGTGGATCCTCTTCTCTTCAGTCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAACAATCTTCAGTGTGCAAGAAAAGACGGCAGGGGTAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGTTGCTCCGCGAGTGGAAGGCAGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAGCGAACTAGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCATTAACTAAACCTGGGCCATTGAAGACTGAGCTCCAAACAAGCAACATTAGTGACAACAATTTTCAGTTTTTTCAAGACAAGCATTTTGATGATAACCAACCTCTAGGTCATAATTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAACTCAGATATGGCACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCCAGTAGGTCACAACTCTGATTTGATTGGTCAGTTGGATGTATATCAGGACCTCAGGCACAACACAGAAATAAAAAACTCAGAATCAACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGACACTGTGCAGCATGGAGAAAACATTATACCAAACATTCTTCCAAATATTTGCCCTCCACCTTCTGCCTTCTTAGCCCCAAAATGTGCCCTGTGGGACTGTTTCAGACCTGCTCAAGGGGTAGAATGGTGTCAGAATTACTGTAGCAGTTGCCATGAGCTATTGGCAAATAATGAGGGTCTGCCTGGCATGACTCCAATTTTGCGACCTGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACACAGGGCAAGGAAGTGGGCATCCCTAGTTGTGAAGGCGCTGCATCAACTAAATCCCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTCGACAAGCCTAGAAGGGCATTTGAAAGTGGTAATAGAAAACAAAGATCACTTCCAGATTACAGCGGTCGCGGTTGGCATGAATCGAGGAAGCAGGTGATGAAAGAACATGGGGGACAAAAGAGGTCCTATTACATGGACCCTCAGCCCCTTTCTTATCTCGAGTGGCATTTGTACGAGTATGAGATCAACAACCATGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTTACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGGCAGCTTACTGCTGCTGTTCTATCATGTGATGATGGAGTACCCATCAAGGGAAAAACAAATGCCAAGTCTGAGAATGATGGATCTCCTGAAAAGTAA 1446 0.4281 MRESSKGKCGSSSLQSMKEKEKHLVDKIQGIFNNLQCARKDGRGNDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNISDNNFQFFQDKHFDDNQPLGHNFEGSASTLYNNAFNNSDMAQLDFHPFSLNQDMNHNPVGHNSDLIGQLDVYQDLRHNTEIKNSESTQFSLEGFDCSQFFGAEDTVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGQLTAAVLSCDDGVPIKGKTNAKSENDGSPEK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00915 481 PANTHER TRANSCRIPTION FACTOR VOZ1 1 475 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00915 Spst-Chr11 33063190 33066054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00915 5 454 VOZ-9 Transcription Factor Family AT1G28520 52.318 7.58e-157 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Spst11g00915 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00915 - - gmx:100808629 887.1