Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00913 ATGCAAAATATGGATTTTGATAATGAAGATCATTCTTCCAAACTACTTCGAGCTCAGACCCACATATTTAACCAAGCTTTTAGTTTCATAAACTCTATGTCCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATACACAAGTATGGCCAACCTATGCCACTCTCACAACTCGTTGCTTCACTTCCAATTCACCCTTCCAAGACTTGCTTCATTTCCCGCTTGATGCAAATTTTGATCCATTCTGGTTTTTTCTCTCAACACAATGTCACTGATAATGAGCAAGAAGTGAGTTATGTGCTAACTGATGCATCTAGACTACTCCTTAAGGACCATCCCTTTTGTATGACATCTCTGCCACAAGCCATACTTGATCCAATTTTGGTCAATCCATGGTTTCAATTCTCCACTTGGTTCACAAATGATGACCCTACACCATTTCACACACAATATGGGATGACTTTCTGGGATTATGCTAGCCGGGAGCCCAAACTCAATCACCTTTTCAATGATGCCATGACTAATGACACTCGATTGATTTCCAGTGTGGTGATTGAGAAGTGCAAGGAAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACTATGGCTAAGGCCATCGTCAAGTCATTTCCACACTTGAAGTGCACAGTTTTTGATCTCCCACATGTTGTTCAGGGCTTGCAAGGAACGGAGAACATAGAATATGTTGCAGGGGACATGTTTGAAGCAATCCCTTCTGCTGATTCCATCATGTTGAAGACTATAATGCATGACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGCAAACAAAGATAAAGGAAAAGTGATTATCATAGATGTGGTGATGGGAAATGTGAAAGGAGACAATAAACTAGATCAACCAAAACTCTACTACGATATGGAGATGATGGTGATGGTTAGTGGAAAAGAGAGAAATGAGAGAGACTGGGCTAAATTGTTTTTTTCTGCAGGGTTCAATAACTACAAGATAACTCCAGTTCTAGGTTTCAAGTCTCTTATAGAGGTTTATCCATAG 1080 0.4037 MQNMDFDNEDHSSKLLRAQTHIFNQAFSFINSMSLKCAIDLCIPDVIHKYGQPMPLSQLVASLPIHPSKTCFISRLMQILIHSGFFSQHNVTDNEQEVSYVLTDASRLLLKDHPFCMTSLPQAILDPILVNPWFQFSTWFTNDDPTPFHTQYGMTFWDYASREPKLNHLFNDAMTNDTRLISSVVIEKCKEVLEGLESLVDVGGGTGTMAKAIVKSFPHLKCTVFDLPHVVQGLQGTENIEYVAGDMFEAIPSADSIMLKTIMHDWNDEECLKILKRCKEAIANKDKGKVIIIDVVMGNVKGDNKLDQPKLYYDMEMMVMVSGKERNERDWAKLFFSAGFNNYKITPVLGFKSLIEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00913 359 CDD AdoMet_MTases 199 297 - -
Spst11g00913 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 359 IPR016461 GO:0008168
Spst11g00913 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 114 IPR036390 -
Spst11g00913 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Spst11g00913 359 Pfam O-methyltransferase domain 135 341 IPR001077 GO:0008171
Spst11g00913 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Spst11g00913 359 FunFam Coniferyl alcohol 9-O-methyltransferase 5 109 - -
Spst11g00913 359 PANTHER O-METHYLTRANSFERASE 16 344 IPR016461 GO:0008168
Spst11g00913 359 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Spst11g00913 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
Spst11g00913 359 FunFam O-methyltransferase ZRP4 111 359 - -
Spst11g00913 359 Gene3D - 5 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00913 Spst-Chr11 33053917 33055316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00913 33 345 Monolignol Biosynthesis Gene Families AT5G54160 31.761 6.74e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00913 - K16040 gmx:100793263 635.95