Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00910 ATGGTGGGTCCCATTCTTCGTTCTCTCTGGTCCTCTACCAGAAAATCCTTCTCCTCTTCTTCTCCTCCTTTAACCCACTCCCTCTTCTTCTCACGCGCCTTCGCCGCCGCTCCAGCCGCCGCCCCCGCCGTCGCTACTACAGCCTCCTCCCTCGACCCCACCCGCCTCCGCAACGTGGCCGTGATTGCCCATGTAGACCACGGCAAGACCACGCTCATGGACCGCCTCCTCCGCCAGTGCGGCGCCGACATCCCCCACGAGCGCGCTATGGACTCCATATCGCTCGAGCGCGAGCGTGGCATCACCATCGCCTCTAAGGTTACGTCTGTTTCGTGGAAGGAGAATGAGCTGAACATGGTTGATACTCCTGGACACGCTGATTTTGGTGGTGAGGTTGAGCGTGTTGTTGGTATGGTGGAGGGAGCAATTTTGGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAGTTTGTTCTTGCAAAGGCCCTGAAGTATGGATTGCGGCCTATTCTTCTTCTAAACAAAGTAGACCGTCCTTCAGTTACTGAGGAGACATGTGATGAAGTTGAGAGCCTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAGCAACTAGACTTTCCTGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCCACCACGTTTACCAAGGATCCTCCTGCTGAGGCCAAAAATATGGCACAGTTGCTTGATGCAGTTGTAACAAATGTCCCACCACCAAATGCAAACATTGATGCGCCTTTCCAAATGCTGGTTTCAATGATGGAACGAGATTTCTATCTTGGGCGAATTTTGACTGGACGCATATTCTCTGGGGTTGTTCGGGTTGGTGACCGGGTTCATGGGTTACGAAATAAAGATTCTGGTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAAGAAGGGTACAAACATGGTTCTAACTGATTGTGCTGGAGCTGGTGATATAATATCAGTTGCTGGCCTGTCAAGTCCATCAATAGGCCATACAGTGGCAACTGTGGAGATTATGTCTGCTTTGCCCACAATTGAATTGGACCCTCCGACAATTTCCATGACTTTTGGTGTGAATGACTCCCCATTGGCTGGTCGTGATGGCACTCATTTGACTGGGGGGAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACCAACCTTGCCATAAATGTGCTTCCAGGCTTATCAGAATCATTTGAAGTTCAGGGAAGAGGAGAGCTACAGCTAGGTATTTTAATTGAGAATATGAGACGAGAAGGATTTGAGTTATCTGTCTCTCCACCTAAAGTCATGTATAAAACTGAAAACAGTCAGAAGCTTGAGCCAGTAGAAGAAGTTACAATTGAGGTGAATGACGAGCATGTTGGCTTGGTAATGGAGGCCTTATCTCATAGACGAGCTGAGGTTACCGACATGGGTCCTGTTCCAGGAACTGTTGGTCGAACTAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGGTACAGGAGTGTGTTCAGCAGTGACACACGTGGAACTGGATTCATGCATCGTGCTTTCCATGCATATGAACAATTTCGCGGCCCTCTTGGCAATGTCAGAAAAGGAGTACTGGTGTCAATGGGTTTTGGTACTATCACAGCTCATGCATTGATGAGCTTAGAAGCTCGAGGGACTCTTTTTGTAACTCCTGGAATGGAGACGTATGATGGAATGATTGTTGGAGAACATTCACGGGATACAGATCTTGATGTGAATCCAGTGAGGGCCAAAGAACTTACAAATGTGCGTGCTGCTTCCAAAGATGAGAATGTGAGGCTGACTCCCCCTCGCCTGATGACACTTGAAGAAGCTATAGGCTATGTAGCTTCCGATGAGCTTATTGAGGTTACACCAAAAGCCATTCGATTACGCAAGAAATACCTTGATGTTAACAAGCGGAAAACCATGAGTAAAAGGCCAAAGGAATGA 1995 0.4812 MVGPILRSLWSSTRKSFSSSSPPLTHSLFFSRAFAAAPAAAPAVATTASSLDPTRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEAKNMAQLLDAVVTNVPPPNANIDAPFQMLVSMMERDFYLGRILTGRIFSGVVRVGDRVHGLRNKDSGAEKIEDGKVVKLMKKKGTNMVLTDCAGAGDIISVAGLSSPSIGHTVATVEIMSALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENSQKLEPVEEVTIEVNDEHVGLVMEALSHRRAEVTDMGPVPGTVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFHAYEQFRGPLGNVRKGVLVSMGFGTITAHALMSLEARGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRAKELTNVRAASKDENVRLTPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKTMSKRPKE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00910 664 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 91 106 IPR031157 -
Spst11g00910 664 PRINTS GTP-binding elongation factor signature 98 106 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 PRINTS GTP-binding elongation factor signature 118 128 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 PRINTS GTP-binding elongation factor signature 170 179 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 PRINTS GTP-binding elongation factor signature 58 71 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 PRINTS GTP-binding elongation factor signature 134 145 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 Gene3D Elongation Factor G (Translational Gtpase), domain 3 364 648 - -
Spst11g00910 664 Pfam Elongation factor Tu domain 2 273 346 IPR004161 GO:0005525
Spst11g00910 664 SUPERFAMILY EF-G C-terminal domain-like 361 444 IPR035647 -
Spst11g00910 664 Pfam Elongation factor G C-terminus 453 536 IPR000640 -
Spst11g00910 664 Pfam Elongation factor Tu GTP binding domain 55 249 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 Gene3D Translation factors 253 357 - -
Spst11g00910 664 Gene3D - 54 252 IPR027417 -
Spst11g00910 664 CDD BipA_TypA_C 455 535 IPR035651 -
Spst11g00910 664 CDD TypA_BipA 56 251 IPR047041 -
Spst11g00910 664 NCBIfam translational GTPase TypA/BipA 56 656 IPR006298 GO:0003924|GO:0005525
Spst11g00910 664 SUPERFAMILY EF-G C-terminal domain-like 455 571 IPR035647 -
Spst11g00910 664 Gene3D bipa protein 541 656 IPR042116 -
Spst11g00910 664 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 53 226 - -
Spst11g00910 664 CDD BipA_III 363 440 IPR047043 -
Spst11g00910 664 FunFam GTP-binding protein TypA 446 540 - -
Spst11g00910 664 Gene3D - 446 540 - -
Spst11g00910 664 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 54 252 IPR000795 GO:0003924|GO:0005525
Spst11g00910 664 FunFam GTP-binding protein TypA 364 473 - -
Spst11g00910 664 FunFam GTP-binding protein TypA 55 252 - -
Spst11g00910 664 CDD BipA_TypA_II 259 356 IPR047042 -
Spst11g00910 664 FunFam Elongation factor family protein 253 357 - -
Spst11g00910 664 NCBIfam small GTP-binding protein domain 56 196 IPR005225 GO:0005525
Spst11g00910 664 SUPERFAMILY Translation proteins 201 357 IPR009000 -
Spst11g00910 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 261 IPR027417 -
Spst11g00910 664 FunFam GTP-binding protein TypA 541 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00910 Spst-Chr11 33026612 33034943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00910 55 179 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 1.51e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00910 K06207 - gmx:100789218 1201.42