Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00904 ATGGCTCAATTGCCACCAAAAGTTCCAAACATGACACCCACTTGGTCAGAGTTTACTACTCACCAAAAGATGTCTTTCCTCAAAACAATGACACCAAACATGTCAAACCAAAACCCTTCGTGGGTGGATGAGTTTGTAGACTTCTCTGCGGCAAGGCGTGGTGCTCACCGACGGGCTGTCAGTGACTCTATTGCCTTTCTTGAGACACCAGCACTGGATCATCATTGTAAATGCCGTGCAAGTGGTGACGATGACAACGAGTTTGAAAGGTTTGATGATGAACAATTCATGTCCATGTTTAGTGATGAGGCTTCAGGAAATAATAATAACAACACGACGGCACCCACATTGTCCTACTCCAACCCTTCTACACCCTCTGACCACAACAGCATCAACGATGAGCAGAAAATGAACAAGGAAAAGGAGGAGGAAGAGGAGAAGAACCAAGTGAAGAGTGAATCAGATGAAGATGAAAGCCAATGCAAGCAAGAAATCACAGAAACTCCAGATGATTGTAATAATAGTAATGCAAATGCGACAACTTGTTCCAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAACGAAGTGTGACTTCATTACAGGCAGAAGTTTCAGTACTGTCTCCGCGGGTTGCATTTTTGGATCATCAACGTTTGCTGTTAAATGTGGACAACAGTACTTTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAGCAAAACATAAAGAATATGGACAATGCTGCAGGATCACCATCCCAATCCCCATTACCATCTCCAAAACCACTATGTGATACACACACTGAGAAGGAACAGCTTATCAATGTTTGA 972 0.4362 MAQLPPKVPNMTPTWSEFTTHQKMSFLKTMTPNMSNQNPSWVDEFVDFSAARRGAHRRAVSDSIAFLETPALDHHCKCRASGDDDNEFERFDDEQFMSMFSDEASGNNNNNTTAPTLSYSNPSTPSDHNSINDEQKMNKEKEEEEEKNQVKSESDEDESQCKQEITETPDDCNNSNANATTCSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSTLKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNMDNAAGSPSQSPLPSPKPLCDTHTEKEQLINV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00904 323 Coils Coil 270 290 - -
Spst11g00904 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 241 IPR004827 GO:0003700|GO:0006355
Spst11g00904 323 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Spst11g00904 323 SMART brlzneu 187 251 IPR004827 GO:0003700|GO:0006355
Spst11g00904 323 Gene3D - 190 261 - -
Spst11g00904 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Spst11g00904 323 MobiDBLite consensus disorder prediction 166 183 - -
Spst11g00904 323 Pfam bZIP transcription factor 191 235 IPR004827 GO:0003700|GO:0006355
Spst11g00904 323 Coils Coil 134 160 - -
Spst11g00904 323 MobiDBLite consensus disorder prediction 101 183 - -
Spst11g00904 323 MobiDBLite consensus disorder prediction 132 165 - -
Spst11g00904 323 SUPERFAMILY Leucine zipper domain 191 245 IPR046347 GO:0003700|GO:0006355
Spst11g00904 323 MobiDBLite consensus disorder prediction 292 323 - -
Spst11g00904 323 MobiDBLite consensus disorder prediction 101 131 - -
Spst11g00904 323 FunFam Basic leucine zipper 61 190 263 - -
Spst11g00904 323 CDD bZIP_plant_RF2 192 242 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00904 Spst-Chr11 32974683 32976806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00904 1 268 bZIP Transcription Factor Family AT3G58120 56.949 2.74e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst11g00904 bZIP_2 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00904 - - gmx:778128 464.151