Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00900 ATGAGGAGCAGCGTAGGAGAAATTGTTCAAGTGGAAGGAGGGCACATTGTTAGGTCCACAGGTAGAAAAGATCGCCACAGCAAGGTCTATACTTCCAAAGGACCTCGTGATCGCCGTGTTAGACTCTCAGCACACACAGCCATTGAGTTCTACGATGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTGATCAAGAAGGCGAAGTCTTCCATTGACAAACTTGCTGAGCTTCCTCCATGGCATCCACCTACTCATGAGGAAGGGCGGCATGATGCTGCAGGATCAAGTGGAATCATGGCAATTGAACAACAAGAAAAACATCAACAGCAACAGTCAGAGTCTTGTGGTTACAATTTTCAGCTCCAAAGGCAATTGGGGGCCTTTATTTCAACCCATGTTGACACTGACCCCATCAATTTTCAAACCAACAACTCCTCGGAAGATCTTGGTCTATCTCTCCATTGTTTCCAAGACCACCCAGGCCTCATTCATTGGCAATCACAGCAAGGTGCAAATCAAACACCTCCTTCAAATGAACACCAAATTCAAACCCTTTTTGCTGGCTCAACCCCAGTTGGGTTTGAGAACCATTATCAAAGAACTGTGACTTGGAACAATGAAGCAACAACCGGTGATCATATGAACAGATTGGGATTCTTTCTCAACTCACAGCCATTTTTAGGCCAAGGTTCTGGTTCTGGTCCAGCTTATGTTCAAAGTGAGACCCTTCAGTCCAGCTTTTCATTTCCACTGACTTCCTCTGAGCATCAGAGGCCCCAGCCAGTTCACCAAGCTTCCATCTTTGGTAGCAGGTTTGTGCCTGACGGATTAGTTGAGTTCTGCATTCAAGATAGAATTCAAGGTGCGGAAGAGAACCGTGGGGTTGCTTCCAATAGGCCCTCTTCTTCTACTAGTTCTATCCACTGA 945 0.4646 MRSSVGEIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPPTHEEGRHDAAGSSGIMAIEQQEKHQQQQSESCGYNFQLQRQLGAFISTHVDTDPINFQTNNSSEDLGLSLHCFQDHPGLIHWQSQQGANQTPPSNEHQIQTLFAGSTPVGFENHYQRTVTWNNEATTGDHMNRLGFFLNSQPFLGQGSGSGPAYVQSETLQSSFSFPLTSSEHQRPQPVHQASIFGSRFVPDGLVEFCIQDRIQGAEENRGVASNRPSSSTSSIH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00900 314 MobiDBLite consensus disorder prediction 18 37 - -
Spst11g00900 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 266 IPR005333 GO:0003700
Spst11g00900 314 Pfam TCP family transcription factor 21 116 IPR017887 -
Spst11g00900 314 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00900 Spst-Chr11 32941984 32942928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00900 5 88 TCP Transcription Factor Family AT3G15030 88.095 1.07e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst11g00900 TCP 6.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00900 - - vum:124834546 561.607