Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00883 ATGGAACCAAATGAGAGACAAGGCATATGGTGTCTAGGAGGACTCTCTTCATTATCAATGACCAACAAATCATTCACATCCCAAAGCATTCAAAATTCAAGAGCTTATTCCCAAAACTTTTCTTATAATATAAATACAGCAATGGGTTTTCGTTTACATGGTATCAGAAAGGCAATATTTGCAGCAAATCAAACATCTTCAAAAGCAGCTGATGCACAAAAGGGTCATCTTGCAGTCTATGTCGGGGAGAAAATGAAGCGATTTGTGATCCCTGTATCATACTTGAATAAACCTTCATTCCAGCACCTCTTGAATCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGAAGTCTTCCAACATATAACTTCTTGCTTGAATGGACAATAA 420 0.3857 MEPNERQGIWCLGGLSSLSMTNKSFTSQSIQNSRAYSQNFSYNINTAMGFRLHGIRKAIFAANQTSSKAADAQKGHLAVYVGEKMKRFVIPVSYLNKPSFQHLLNQAEEEFGYDHPMGGLTIPCSEEVFQHITSCLNGQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00883 139 Pfam Auxin responsive protein 57 136 IPR003676 GO:0009733
Spst11g00883 139 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 63 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00883 Spst-Chr11 32813723 32814546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00883 64 136 Calmodulin-binding Proteins AT3G43120 46.575 2.67e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00883 K14488 - gmx:100820621 167.162