Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00882 ATGGGTTTTCGTTTATCTGGATTCAGAACGGCACTATTTGTAGGAAATGAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGCTATCTTTCAGTATATGTGGGAGAGAAAATGAAGCGGTTTGTAATCCCAGTATCATACTTGAATCAACCTTCATTCCAGGAGTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATACCTTGCAGTGAAGATGTTTTCCAACATATAACTTGTCACTTGAATGGGGTTGATACGAGTGACGTCTTCTCTGGCTCATGTGGAAGTGAATTAGATCACGGTGTCACTGCTGTGAAATTTGATGTTAGTGATGATAGGACTGAGTATTGGTTCGTTAAGAACTCATGGGGTAAAGAAGGGTAG 408 0.4216 MGFRLSGFRTALFVGNEASSKAVDAPKGYLSVYVGEKMKRFVIPVSYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFQHITCHLNGVDTSDVFSGSCGSELDHGVTAVKFDVSDDRTEYWFVKNSWGKEG 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00882 135 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 89 IPR003676 GO:0009733
Spst11g00882 135 Gene3D Cysteine proteinases 66 135 - -
Spst11g00882 135 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
Spst11g00882 135 SUPERFAMILY Cysteine proteinases 93 133 IPR038765 -
Spst11g00882 135 Pfam Papain family cysteine protease 95 134 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00882 Spst-Chr11 32812472 32813547 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00882 24 85 Calmodulin-binding Proteins AT3G43120 51.613 8.53e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00882 K14488 - gmx:100820621 162.54