Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00881 ATGGGTTTCCGTTTACCCGGTATCAGAAAGGCATTATTTGCAGCAAATCAAGCATCTTCAAAAGCTGTGGACGTGCCAAAGGGATATCTTTCAGTCTATGTTGGAGAAAAAATGAAGCGGTTTGTGGTCCCTATATCATACTTGAACCAACCTCCATTCCAGGACTTGTTGAGTCAAGCTGAAGAAGAGTATGGATATTATCATTCCATGGGTGGTCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACGCATAACTTCTTCCTTTAATTGA 273 0.4176 MGFRLPGIRKALFAANQASSKAVDVPKGYLSVYVGEKMKRFVVPISYLNQPPFQDLLSQAEEEYGYYHSMGGLTIPCSEDVFQRITSSFN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00881 90 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
Spst11g00881 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00881 Spst-Chr11 32811676 32811948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00881 24 83 Calmodulin-binding Proteins AT3G43120 55.000 3.58e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00881 - K14488 gmx:100797634 162.155