Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00879 ATGGGTTTTCGTTTACCTGGTATCAGAAAGACACTATTGGCAAATAATCAAGCATCTTCAAAAGCAGTAGATGTTCAAAAGGGCTTTCTCGCAGTTTACGTCGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTATCATACTTGAACCAACCTTCTTTCCAGAACCTGTTGAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCATGCAGCGAACATGTCTTCCAACATATAATTTCTTGCTTGAATTGA 273 0.4066 MGFRLPGIRKTLLANNQASSKAVDVQKGFLAVYVGEKMKRFVIPVSYLNQPSFQNLLSQAEEEFGYDHPMGGLTIPCSEHVFQHIISCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00879 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Spst11g00879 90 Pfam Auxin responsive protein 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00879 Spst-Chr11 32807738 32808010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00879 17 89 Calmodulin-binding Proteins AT3G43120 46.575 9.98e-21 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00879 K14488 - gmx:100820621 162.155