Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00877 ATGCCTTGTCTCTCATTTGAAAATGAAGCGTCTTCAAAAGCGGTGGATGCACCAAAGGGCTATATTTCGGTATACGTGGGAGAGAAAATGAAGCGATTTGTGATCTCACTGTCGTACTTGAACCAACCTTCATTCCAAGACTTGTTAAGTCAGGTGGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACGCATAACTTCTTGCTTGAATTGA 249 0.4378 MPCLSFENEASSKAVDAPKGYISVYVGEKMKRFVISLSYLNQPSFQDLLSQVEEEFGYDHPMGGLTIPCSEDVFQRITSCLN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00877 82 Pfam Auxin responsive protein 11 81 IPR003676 GO:0009733
Spst11g00877 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00877 Spst-Chr11 32798604 32799064 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00877 16 81 Calmodulin-binding Proteins AT3G43120 45.455 5.29e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00877 K14488 - gmx:100820621 142.124