Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00875 ATGGGTCTCCGTTTACATGCTATTCGACTAGCATCATCCACAGCTAGGCCAGCAACTTCAAAATCTGTAGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGTTTTGTGATCCCTGTATCATACTTGAACCAATCTTCATTCCAGGAGTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTTACAATTCCTTGCAGCGAAGATGTCTTTCGATATTGCAACTTTTCATTTGGTTATGCTTTAGCAATTTGCCTGCACGAAGTTGACATAGTTTTCAAACCTCCATTTTTTTTAATGTTCCAAACTTTCCAATACGCACAATCCTCTTGA 366 0.4098 MGLRLHAIRLASSTARPATSKSVEVPKGYLAVYVGEKQKRFVIPVSYLNQSSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFRYCNFSFGYALAICLHEVDIVFKPPFFLMFQTFQYAQSS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00875 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 83 IPR003676 GO:0009733
Spst11g00875 121 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00875 Spst-Chr11 32794615 32796653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00875 24 84 Calmodulin-binding Proteins AT3G43120 57.377 8.07e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00875 - K14488 gmx:106798972 139.813