Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00871 ATGGGTTTTCGTTTACATGGTATCCGAAAGGCATTATTTTCAGCAAATCAAGCAGCTTCAAAAGCAGTGGATGCACCAAAGGGCTATCTTGCAGTCTATGTCGGAGAGAAAATGAAGCGGTTTGTAATCCCTGTATCATACTTGAACCAACCTTCATTCCAGGACTTGTTGCGTCAAGCTGAGGAAGAGTTTGGATATGAACATCCTATGGGAGGCCTCACAATTCCTTGCAGTGAAGATGGGATACAGTGA 252 0.4365 MGFRLHGIRKALFSANQAASKAVDAPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLRQAEEEFGYEHPMGGLTIPCSEDGIQ 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00871 83 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 80 IPR003676 GO:0009733
Spst11g00871 83 Pfam Auxin responsive protein 15 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00871 Spst-Chr11 32783911 32784593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00871 14 77 Calmodulin-binding Proteins AT3G43120 50.000 3.53e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00871 - K14488 gmx:100797634 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00871 11 32783911 32784593 Spst11g00871 11 32783911 32784593 ECH