Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00866 ATGGGTTTCCATTTGCGTTCTATTCGACGGGCATCATTAACAGCTAGCCCAGCAGCATCAAAATCAGAACAAGTCCCAAAGGGTTATCTTGCAGTCTATGTTGGAGAGAATCAAAAGCGGTTTGTGATTCCCATATCATACTTGAATCAACCTTCATTCCAATACTTGCTGTGTCAAGCTAAAGAAGAGTTTGGATACGATCATCCCATGGTCTCAACACCTACACCAACAATGGGTTTTCGTTTACCTGGAATCAGAAAGGCATCGTTTGCTTCAAACCAAACACCTTCAAAAGCATTGGATGTTCCAAAGGGCTACCTTGGAGTCCATCAAGCCGAGGAAGAATTTGGGTATCACCATCCCATGGGTTGTCTCACAACACCATGCAAGGAGGATGAATTCCTAAGCGTCATCGCTTCCTTGAATGACTTGTAA 435 0.4368 MGFHLRSIRRASLTASPAASKSEQVPKGYLAVYVGENQKRFVIPISYLNQPSFQYLLCQAKEEFGYDHPMVSTPTPTMGFRLPGIRKASFASNQTPSKALDVPKGYLGVHQAEEEFGYHHPMGCLTTPCKEDEFLSVIASLNDL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00866 144 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 71 IPR003676 GO:0009733
Spst11g00866 144 Pfam Auxin responsive protein 13 69 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00866 Spst-Chr11 32756001 32761539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00866 24 68 Calmodulin-binding Proteins AT3G43120 55.556 2.02e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00866 - K14488 pcin:129286196 167.933