Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00865 ATGGGTTTTCGTTTCCCTGGAATCAGAAAGGCATCAGTCGCTACAAATCATGTGCCAAAGGGCTATCTTGCAGTGTATGTTGGAAAGAAAATGAAGCGGTTTGTTATCCCCGTATCATACTTGAACCAACCGTCCTTTCAGCAATTGTTGAATCAAGCTGAAGAAGAATTCGGGTATGACCATCCAACGGGTGGTCTTACAATACCATGCAAGGAGGATGAGTTCCTAACTGTCACATCTCAGTTTGAATGA 252 0.4325 MGFRFPGIRKASVATNHVPKGYLAVYVGKKMKRFVIPVSYLNQPSFQQLLNQAEEEFGYDHPTGGLTIPCKEDEFLTVTSQFE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00865 83 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 81 IPR003676 GO:0009733
Spst11g00865 83 Pfam Auxin responsive protein 13 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00865 Spst-Chr11 32754990 32755241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00865 18 75 Calmodulin-binding Proteins AT3G43120 56.897 2.78e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00865 K14488 - gmx:100786685 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00865 11 32754990 32755241 Spst11g00865 11 32754990 32755241 ECH