Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00860 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCAATATTTACAGCAAATCAAACATCTTCAAAAGCAGCTGATGCACAAAAGGGATATCTTGCAGTCTATGTCGGGGAGAAAATGAAGCGATTTATGATCCCTGTATCATACTTGAACAAACCTTCATTCCAGCACCTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCATGCAGTGAAGAAGTCTTCCAACATATAACTTCTTGCTTGAATGGACAATAA 279 0.405 MGFRLPGIRKAIFTANQTSSKAADAQKGYLAVYVGEKMKRFMIPVSYLNKPSFQHLLSQAEEEFGYDHPMGGLTIPCSEEVFQHITSCLNGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00860 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Spst11g00860 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00860 Spst-Chr11 32739684 32739962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00860 14 91 Calmodulin-binding Proteins AT3G43120 46.154 4.30e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00860 K14488 - gmx:100820621 171.014