Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00859 ATGGGTTTTCGTTTATCTGGTATCAGAAAGACACTATTGGCAGCTAATCAAGCATCTTCAAAAGCAGTAGATGTGCAAAAGGGCTTTCTCGCAGTTTACGTCGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTATCATACTTGAACCAACCTTCTTTCCAGAACCTGTTGAGTCAAGCCGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCATGCAGCGAACATGTCTTCCAACATATAATTTCTTGCTTGAATTGA 273 0.4212 MGFRLSGIRKTLLAANQASSKAVDVQKGFLAVYVGEKMKRFVIPVSYLNQPSFQNLLSQAEEEFGYDHPMGGLTIPCSEHVFQHIISCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00859 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Spst11g00859 90 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00859 Spst-Chr11 32732115 32732387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00859 17 89 Calmodulin-binding Proteins AT3G43120 46.575 4.49e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00859 K14488 - gmx:100820621 161.384