Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00857 ATGCGTCCACCGCGGAAGAAGGTCAATTTCCGCCACGGCGACAAGGTCGAGGTCTGCAGCAACGAGGAGGGTTTCTTCGGCTCCTACTACCTCGCCACTGTCGTCTCGCGCCTCGACAACGGCCTCTACGTCGTACGCTACGACACGCTGCTCGAGGAGGACGGCTCCCAGCCCCTCACGGAGACCCTCTTCCCCAAAGAACTCCGCCCCAAGCCGCCGCGCCTCGACTCCTCCTCCTCCTCCTCGTTCAAGCTCTACCAGCGCGTCGACGCCTTCGACAACGACGGCTGGTGGGTCGGCGAGATCACCGGCAAGGCCGACAAACACCACTACTATGTTTATTTCTCCACCACCCACGAAGAGATCGCGTACCCTTCCTCCGCAATTAGGGTTCACCAGGAGTGGCTCAACGGCGAATGGGTTCGCTCCAATTGA 435 0.6115 MRPPRKKVNFRHGDKVEVCSNEEGFFGSYYLATVVSRLDNGLYVVRYDTLLEEDGSQPLTETLFPKELRPKPPRLDSSSSSSFKLYQRVDAFDNDGWWVGEITGKADKHHYYVYFSTTHEEIAYPSSAIRVHQEWLNGEWVRSN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00857 144 CDD Tudor_Agenet_AtDUF_rpt1_3 10 73 - -
Spst11g00857 144 SMART agenet_At_2 81 137 IPR014002 -
Spst11g00857 144 SMART agenet_At_2 8 76 IPR014002 -
Spst11g00857 144 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 142 - -
Spst11g00857 144 CDD Tudor_Agenet_AtDUF_rpt2_4 87 131 - -
Spst11g00857 144 Gene3D - 1 83 - -
Spst11g00857 144 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00857 Spst-Chr11 32725603 32726037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00857 20 135 PHD Transcription Factor Family AT5G58610 31.618 1.55e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00857 - - vra:106753183 239.195