Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00850 ATGCTACTCCATTACACGCCGTTCTCAAATGCTTGGATCTCTCGTCGATGGATTGTTTTCCTTCCGCTTGTTCTCGATTTGAATTTTGGAGTAAATGGAGCTGAGTCTGGGTGCAATGTCGATTCTGAATTTCACCTTTGTCATTGGAGTAATGTTGTATTAGATCCTTTTATGATTGTGCAAATGCTATGTGGCCTCCAGGTTGAAGCTGTTGGAGCTGCAAAAAACATGGAAGAGACACGTGAAGATGCAGGGCCAGCAGAGCGAATGCCATCCAACGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGAATCCGTTTCTTTGAGCTCTCAAGATCAGACGTTAAATAATAAAGAATCATCAGGACTTGCTAACCAAGATGTTATGTCACCTCAAAAGGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCCAATGGTTTTTATTCAGTTGTTCCAGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCAAGCTTTGGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTAGATGCAGAGAAAGATAGAAGGCTATCTATGTTGAAGCAACTAATTGTGGCATTGGTTAAAGGATTGAATTCAAATCCACCAGCAATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAGCGACCAAATGTAGAAAGTTCAGCCAAAGCTGCTTTTGAGGAATCCTCGCACATGTTTGAGAATCGTGGTGTCCAGATGCTAGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCTAATGATGGAGCTGCTGACTGTGTAGACTCTTACAAGCATGTGTCAGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGATTTCCTGGCCAACTATTACCACGATCAACCAAATCAATTCTTATGACACACATTTCTGCAGCTGGAGAAAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTGTTGAAAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGTGTCTTCAAATGTATCAGGTCTTCCCCTGCGAAATATGATGTTACGATCAAATAGCAGTCTGGACAGGAATTTGAATTTTTCACACAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGGAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGTGCACATGGACGGTCCAAGCTTAGTGGTGACAGAACTGCTTGTAGAGGTTTTGCTGATGACCAGTCTGCACCAAGATCCAGCTATAAGTCAGATGGTGCTTCCTCATCAGAAGCTCGCAGAATACGAAGAAGAAGTATCAGCATCACACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTCTAAGAGAGCAAGGGGTTGGTGATAGTTTATTGTCCCATTCTCCAAATGATAGAGCCAGCAGTGCGGATCTTCAGAAAAAAGTGTCAAATTTCCATCTTGATGGTCATCAAGAGAGGTCACCCTTATATTTGCTACACCGTGAACCTGTAAGCTCTCAAAAGGCAATGTCATTACCCTCTTCCCCGCATGATTATAGAGGACAACCTTCTGAGAGAAGCGGAGCATCAGAATATACAATGAATGATGAAATGGAATCTACCTGGAATAAAGTCCTTCAATCACCAATGTTTAACGATAGACCTCTGTTGCCATATGAAGAATGGAATATCGATTTCAATGAATTGACTGTTGGAACCCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGTATTTGGAATGGCACAGATGTCGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCATGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGGTCTTTGTTTTACTTGATTCATGTGAGTGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGGGACATATGCCGGGGCCTAATGCATATACACCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACTGTGAAAATATGTGATTTTGGACTGTCAAGAATAATAACAGATTCTCCCATGAGAGATTCCTCGTCAGCAGGAACTCCAGAATGGATGGCTCCTGAACTAGTTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAGGGCGTGCCTCCGGAGAGGGTGGTTTATACCGTTGCCCACGAGGGTTCTCGATTGGATATTCCTGAAGGCCCGCTAGGCAGGCTGATATCAGAGTGTTGGGCGGAACCCCATGAACGGCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCCATGTGTTAA 2679 0.43 MLLHYTPFSNAWISRRWIVFLPLVLDLNFGVNGAESGCNVDSEFHLCHWSNVVLDPFMIVQMLCGLQVEAVGAAKNMEETREDAGPAERMPSNVSWWPSDFVENFESVSLSSQDQTLNNKESSGLANQDVMSPQKASQILWRTGMLSEPIPNGFYSVVPEKRLKKLFDSIPTLDELQALGGEGFRADVIVVDAEKDRRLSMLKQLIVALVKGLNSNPPAMIKKIAGLVSDFYKRPNVESSAKAAFEESSHMFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAADCVDSYKHVSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEENLQFHRRFEVSSNVSGLPLRNMMLRSNSSLDRNLNFSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSLRAHGRSKLSGDRTACRGFADDQSAPRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNETLKQNRLLREQGVGDSLLSHSPNDRASSADLQKKVSNFHLDGHQERSPLYLLHREPVSSQKAMSLPSSPHDYRGQPSERSGASEYTMNDEMESTWNKVLQSPMFNDRPLLPYEEWNIDFNELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELVRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVAHEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMC 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00850 892 ProSiteProfiles Protein kinase domain profile. 636 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00850 892 MobiDBLite consensus disorder prediction 427 491 - -
Spst11g00850 892 ProSitePatterns Protein kinases ATP-binding region signature. 642 663 IPR017441 GO:0005524
Spst11g00850 892 CDD STKc_MAP3K-like 642 884 - -
Spst11g00850 892 Coils Coil 505 525 - -
Spst11g00850 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Spst11g00850 892 Pfam Ethylene-responsive protein kinase Le-CTR1 134 329 - -
Spst11g00850 892 MobiDBLite consensus disorder prediction 574 597 - -
Spst11g00850 892 SUPERFAMILY Protein kinase-like (PK-like) 610 884 IPR011009 -
Spst11g00850 892 Pfam Protein tyrosine and serine/threonine kinase 637 884 IPR001245 GO:0004672|GO:0006468
Spst11g00850 892 SMART serkin_6 636 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00850 892 FunFam Serine/threonine-protein kinase isoform 1 626 714 - -
Spst11g00850 892 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 363 884 - -
Spst11g00850 892 Gene3D Transferase(Phosphotransferase) domain 1 715 891 - -
Spst11g00850 892 MobiDBLite consensus disorder prediction 572 597 - -
Spst11g00850 892 Gene3D Phosphorylase Kinase; domain 1 629 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00850 Spst-Chr11 32651684 32660674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00850 77 892 MAP Kinase Kinase Kinase AT3G58640 69.343 0.0 1163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Spst11g00850 PK_Tyr_Ser-Thr 3.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00850 - - gmx:100807193 1509.58