Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00839 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGGGGAGGGAATCTAGGGAGCGGAGGCGGATGCCGAGGGTTATGAGTGTCCCAGGGTTTCTCACTGAGGTAGATGATGATCAAGCAGTTAGTGTTTCCTCTGATAATCCATCGACAGTTACTACGGATAGAATGATAATTGTGGCTAACCAGTTACCATTGAAGGCAAAGCGAAGAGAGGACAACAAAGGGTGGTCTTTCAGTTGGAATGAAGATTCATTGCTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGTTCATTACGAGTTGACATTGATCCAGCGGAACAGGATGACGTGTCTCAGCATTTATTGGACAAATTCAAATGTGTCCCGACTTTTCTACCTGCTGACGTTTTGGCAAAATTTTATGATGGCTTTTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTGCCATTTTCAACAGATAAAAGCCACCGATTTGATCGCACTATGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAAAAGGTTGTTGAAATAATAAACCCTGAGGATGATTACATTTGGATTCATGATTATCACTTGATGGTGCTGCCAACTTTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTCCATAGCCCCTTTCCATCATCAGAGATTTACAGGACTCTTCCTGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATTGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGCTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATAAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGAGTCAGTTATGAGAATGGCAGTTGAGGAGACTACGGTAAGGGAGCTCAAACAGCAATTCGAAGGGAAAACCATTTTACTTGGTGTTGATGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGACGAGCTGTTCTGGTCCAGATAGTTAATCCAGCTAGAGGTAAAGGGATACATTTGGAGGAGATACATGCTGAAATACAAGAAAGCTGCGCCAGGATCAACAGGGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTTATTGATAGAGCAGTATCTATTGCTGAAAAAGTTGCCTATTACAGTATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATACATTGCTTGTAGACAGGGAATATCTGATTCTGAATTATGTTCCAGTGTTAGTTTTCCAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGGTGTTCCCCATCACTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCCATCTCAATGGGTGATGGGGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTATTGGTCACATAGTTTCTTGCAAGATATGGAGCGGGCTTGCACAGACCTTCTGAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTTTCCATTGATGCTATGGTTTCAGCTTACAAGAGGTCAAGTAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCGCAGAACTCCATTAATAAGAGTCCAAGCAAGGAGGTCTTGTCTATTATGGAATCACTTAGTGCGGACCCCAAAAATGTTGTTTTCATTGTTAGTGGAAGGGGGAGGAATAGCTTAAGTAACTGGTTTGCTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGTGCCACAATGGAGACTGGGAAATTTGTGGTAAGTCCTCCGACTTTGGATGGATGCAGATAGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCCTCAATTGAAAGAAAAGAAAGTGCTTTAGTCTGGCAGTACCGTGATGCAGACCTCGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGCCAGTTTATTGTTGAAGTAAAACCACAGGATGTGAGCAAAGGTTTGGTTGCTGAAAGGATATTTTCGTCAATGGACGGGAAAGGCAAGCATGCTGACTTTGTTCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGAAATATTCTTGCCACCAATGCTTCTGTGTTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCAAAGTATTATCTTGATGATACAACTGAGGTAACAAGCATGCTAGAATCTTTGGCCGAAGAATCAGATTCTTCACCCTGCATAGGAGAAACCGGGGATTCCTCTCGGAGGCAAGTGTGA 2589 0.4222 MMSRSYTNLLDLASGNFPAMGGRESRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQHLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTMWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMAVEETTVRELKQQFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIHAEIQESCARINRVFGRPGYEPIVFIDRAVSIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISDSELCSSVSFPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMGDGEKQLRHEKHYRYVSTHDVAYWSHSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRSSSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPKNVVFIVSGRGRNSLSNWFAPCKKLGIAAEHGYFLRWCHNGDWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMDGKGKHADFVLCVGDDRSDEDMFEIVSSAISRNILATNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIGETGDSSRRQV 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00839 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 57 316 - -
Spst11g00839 862 Gene3D Glycogen Phosphorylase B; 318 531 - -
Spst11g00839 862 Pfam Glycosyltransferase family 20 64 547 IPR001830 GO:0003824|GO:0005992
Spst11g00839 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 843 IPR001830 GO:0003824|GO:0005992
Spst11g00839 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 593 710 - -
Spst11g00839 862 FunFam Trehalose-6-phosphate synthase 2 677 756 - -
Spst11g00839 862 Gene3D Glycogen Phosphorylase B; 57 317 - -
Spst11g00839 862 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 723 854 - -
Spst11g00839 862 CDD HAD_TPP 595 834 - -
Spst11g00839 862 MobiDBLite consensus disorder prediction 840 862 - -
Spst11g00839 862 NCBIfam trehalose-phosphatase 593 842 IPR003337 GO:0003824|GO:0005992
Spst11g00839 862 Gene3D - 593 693 IPR023214 -
Spst11g00839 862 Gene3D - 722 850 IPR023214 -
Spst11g00839 862 Pfam Trehalose-phosphatase 597 831 IPR003337 GO:0003824|GO:0005992
Spst11g00839 862 NCBIfam HAD-IIB family hydrolase 596 800 IPR006379 -
Spst11g00839 862 CDD GT20_TPS 64 547 IPR001830 GO:0003824|GO:0005992
Spst11g00839 862 FunFam Alpha,alpha-trehalose-phosphate synthase 318 531 - -
Spst11g00839 862 SUPERFAMILY HAD-like 594 842 IPR036412 -
Spst11g00839 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00839 Spst-Chr11 32517533 32521677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00839 1 848 Trehalose Biosynthesis Gene Families AT1G06410 77.948 0.0 1382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00839 K16055 - gmx:100811463 1633.62